cps Namespace Reference

Main namespace for all CPS classes, functions etc. More...

Classes
class	cps::Alg
	Alg is the base abstract class for all algorithms. More...
class	cps::AlgDens
	Class for quark condensate calculation. More...
class	cps::AlgEig
	A class implementing a Ritz eigenvalue solver for the fermion matrix. More...
class	cps::AlgEqState
	Plaquette measurement. More...
class	cps::AlgFixGauge
	Performs gauge fixing. More...
class	cps::AlgFourierProp
class	cps::AlgFourierPropDis
class	cps::AlgGheatBath
	Class implementing the gauge field global heatbath algorithm. More...
class	cps::AlgHmc
	A class implementing the Hybrid Monte Carlo algorithm. More...
class	cps::AlgHmd
	A virtual base class for implementing Molecular Dynamics algorithms. More...
class	cps::AlgHmcPhi
	A class implementing the Hybrid Monte Carlo algorithm. More...
class	cps::AlgHmcQPQ
	A class implementing the Hybrid Monte Carlo algorithm. More...
class	cps::AlgHmcRHMC
	A class implementing the Rational Hybrid Monte Carlo algorithm. More...
class	cps::AlgHmdR
	A class implementing the Hybrid Molecular Dynamics (R) algorithm. More...
class	cps::AlgHmdR2
	A class implementing the R2 algorithm. More...
class	cps::AlgHQPotential
class	cps::AlgInst
class	cps::AlgInt
class	cps::AlgIntAB
class	cps::AlgIntLeap
class	cps::AlgIntOmelyan
class	cps::AlgIntCampostrini
class	cps::AlgIntOmelyan44
class	cps::AlgIntOmelyan45
class	cps::AlgIntSum
class	cps::AlgHamiltonian
class	cps::AlgMomentum
class	cps::AlgAction
class	cps::AlgActionBilinear
class	cps::AlgActionRational
class	cps::AlgActionRationalSplit
class	cps::AlgActionBoson
class	cps::AlgActionFermion
class	cps::AlgActionQuotient
class	cps::AlgActionRationalQuotient
class	cps::AlgActionGauge
class	cps::LatticeFactory
	A class implementing many other algorithms in a scriptable manner. More...
class	cps::AlgMeas
class	cps::AlgMom
class	cps::AlgNoise
	Class for noising up a gauge configuration. More...
class	cps::AlgNuc3pt
class	cps::AlgOverRelax
	Class implementing the gauge field global heatbath algorithm. More...
class	cps::AlgPbp
	Class for quark condensate calculation. More...
class	cps::AlgPlaq
	A class implementing calculation of the average plaquette. More...
class	cps::AlgPot
class	cps::AlgPot2
class	cps::AlgRect
class	cps::AlgRemez
class	cps::AlgRandomGauge
	Produces a ramdom gauge tranfromation field. More...
class	cps::AlgRotateGauge
	Application of a gauge transformation. More...
class	cps::AlgStagQuark
class	cps::AlgStagMeson
class	cps::AlgStagMomMeson
class	cps::AlgStagNucleon
class	cps::AlgStagNonLocal
class	cps::AlgNLStagMeson
class	cps::AlgSmear
	Base class for smearing a lattice. More...
class	cps::AlgApeSmear
	Performs APE smearing. More...
class	cps::AlgKineticSmear
	Kinetic smearing. More...
class	cps::AlgHypSmear
	Performs HYP smearing. More...
class	cps::AlgOlegSmear
class	cps::AlgSmear2
	Base class for smearing a lattice. More...
class	cps::AlgApeSmear2
	Performs APE smearing. More...
class	cps::AlgTcharge
class	cps::AlgWspect
class	cps::AlgWspectExtMeson
class	cps::AlgWline
	Measures the Wilson line in all directions. More...
class	cps::Aots
class	cps::ApeSmearArg
class	cps::FloatArray
class	cps::ParamArg
class	cps::ParamArray
class	cps::bigfloat
	Arbitrary precision arithmetic. More...
class	cps::CgArg
class	cps::CgStats
struct	cps::CommonArg
	A container for parameters common to all algorithms. More...
class	cps::CorrFunc
class	cps::DensArg
class	cps::Shift
class	cps::Derivative
class	cps::Diquark
class	cps::BGLAxisMap
class	cps::DoArg
class	cps::DTerms
class	cps::EigArg
struct	cps::EqStateArg
	Container of parameters for AlgEqState. More...
class	cps::FermionVectorTp
class	cps::FixGaugeArg
class	cps::ForceArg
class	cps::FourierPropArg
class	cps::FourMom
class	cps::MomentaList
class	cps::Gamma
class	cps::GhbArg
class	cps::HadronPropS
class	cps::HmcArg
class	cps::HmdArg
class	cps::EvoArg
class	cps::RhmcPolesState
class	cps::HypSmearArg
struct	cps::InstArg
class	cps::IntABArg
class	cps::ActionArg
class	cps::BilinearDescr
class	cps::ActionBilinearArg
class	cps::ApproxDescr
class	cps::RationalDescr
class	cps::EigenDescr
class	cps::ActionRationalArg
class	cps::SplitRange
class	cps::ActionRationalSplitArg
class	cps::BosonDescr
class	cps::ActionBosonArg
class	cps::FermionDescr
class	cps::ActionFermionArg
class	cps::QuotientDescr
class	cps::ActionQuotientArg
class	cps::ActionRationalQuotientArg
class	cps::ActionGaugeArg
class	cps::KineticSmearArg
class	cps::MeasTask
class	cps::MeasArg
class	cps::Meson
class	cps::MesonPropS
class	cps::MomArg
	Structure for arguments to the ::Mom class constructor. More...
class	cps::MomMesonPropS
class	cps::NLocalPropS
class	cps::NLSMesonPropS
struct	cps::NoArg
	An absence of parameters. More...
class	cps::NoiseArg
class	cps::Nuc2pt
class	cps::Nuc3pt
class	cps::Nuc3ptGamma
class	cps::Nuc3ptStru
class	cps::Nuc3ptCons
class	cps::Nuc3ptArg
class	cps::Nuc3ptGammaR
class	cps::NucleonPropS
struct	cps::OverRelaxArg
	The structure holds parameters specific to the gauge field heat bath routines. More...
class	cps::PbpArg
class	cps::PotArg
class	cps::QIO_Prop
class	cps::QPropW
	The Quark Propagator (Wilson type) class. More...
class	cps::QPropWWallSrc
class	cps::QPropWGaussSrc
class	cps::QPropWMultGaussSrc
class	cps::QPropWMomSrc
class	cps::QPropWVolSrc
class	cps::QPropWGFLfuncSrc
class	cps::QPropWPointSrc
class	cps::QPropWBoxSrc
class	cps::QPropWRand
class	cps::QPropWRandWallSrc
class	cps::QPropWRandVolSrc
class	cps::QPropWRandSlabSrc
class	cps::QPropWSeq
class	cps::QPropWSeqMesSrc
class	cps::QPropWSeqBar
class	cps::QPropWSeqProtUSrc
class	cps::QPropWSeqProtDSrc
class	cps::QPropWExpSrc
class	cps::QPropWFactory
class	cps::QPropWArg
class	cps::QPropWGFArg
class	cps::QPropWPointArg
class	cps::QPropWBoxArg
class	cps::QPropWRandArg
class	cps::QPropWSlabArg
class	cps::QPropWExpArg
class	cps::QPropWGaussArg
class	cps::QPropWGFPointSrc
class	cps::QPropWLandauGaugeVolumeSrc
class	cps::QuarkPropS
class	cps::QuarkPropSMng
class	cps::RemezArg
class	cps::StagQuarkSrc
class	cps::StagQuarkArg
class	cps::StagMesonArg
class	cps::StagMomMesonArg
class	cps::StagNucleonArg
class	cps::StagNonLocalArg
class	cps::NLStagMesonArg
class	cps::SpinMatrix
struct	cps::ThreePtArg
	The structure holds parameters relevant to the three-point functions measurement. More...
class	cps::WspectAxialCurrent
class	cps::WspectBaryon
struct	cps::WMesonBEOpInfo
struct	cps::WMesonBEStateInfo
class	cps::WspectExtendedMesonsBE
struct	cps::WMesonOpInfo
struct	cps::WMesonStateInfo
class	cps::WspectExtendedMesons
class	cps::FermionVector
class	cps::WspectField
class	cps::WspectFuzzing
class	cps::WspectGinfo
class	cps::WspectHyperRectangle
class	cps::WspectMesons
class	cps::WspectMomenta
class	cps::WspectQuark
class	cps::WspectOutput
class	cps::WspectArg
struct	cps::su3_vector
class	cps::WilsonVector
struct	cps::color_wilson_vector
struct	cps::wilson_matrix
class	cps::WilsonMatrix
struct	cps::BGLCPSTorusStatus_tag
struct	cps::BGLCPSTorusPacketHardHeader_tag
struct	cps::_BGLCPSTorusPacketSoftHeader_tag
struct	cps::_BGLCPSTorusPacketHeader_tag
class	cps::MPIRequestManager
	This handles the MPI requests. More...
class	cps::SCUDirArg
	A class describing the data to be communicated,. More...
struct	cps::_BGLQuad_tag
class	cps::CheckSum
struct	cps::Clover
	A container of data relevant to the clover matrix multiplication. More...
class	cps::CommandLine
class	cps::GlobalDataShift
class	cps::DiracOp
	A class representing operations on the Dirac operator. More...
class	cps::DiracOpStagTypes
	A class describing the Dirac operator for all sorts of staggered fermions. More...
class	cps::DiracOpStag
	A class describing the Dirac operator for staggered fermions. More...
class	cps::DiracOpAsqtad
	A class describing the Dirac operator for Asqtad improved staggered fermions. More...
class	cps::DiracOpP4
	A class describing the Dirac operator for P4 staggered fermions. More...
class	cps::DiracOpWilsonTypes
	A class describing the Dirac operator for all sorts of Wilson fermions. More...
class	cps::DiracOpWilson
	A class describing the Dirac operator for Wilson fermions. More...
class	cps::DiracOpWilsonTm
	~~ A class describing the Dirac operator for twisted-mass Wilson fermions. More...
class	cps::DiracOpClover
	A class describing the Dirac operator for clover-improved Wilson fermions. More...
class	cps::DiracOpDwf
	A class describing the Dirac operator for domain-wall Wilson fermions. More...
class	cps::dump_xml
struct	cps::Dwf
class	cps::Error
	A class to handle the printing of error messages. More...
class	cps::DataConversion
class	cps::FPConv
class	cps::GlobalJobParameter
	Global parameters. More...
class	cps::TypeSafeReducer< Tp >
class	cps::Gsum64Ext
class	cps::GwHb
class	cps::IntConv
class	cps::IoStyle
class	cps::ParallelIO
class	cps::SerialIO
class	cps::LatticeContainer
class	cps::LatData
class	cps::LatVector
class	cps::LatMatrix
class	cps::GCFheaderPar
class	cps::LatHeaderBase
class	cps::LatticeHeader
class	cps::LatRngHeader
class	cps::LatRngIO
class	cps::LatRngRead
class	cps::LatRngWrite
class	cps::FwilsonTypes
	A class containing methods relevant to all Wilson type fermion actions. More...
class	cps::Fwilson
	A class implementing Wilson fermions. More...
class	cps::FwilsonTm
	A class implementing twisted mass Wilson fermions. More...
class	cps::Fclover
	A class implementing clover improved Wilson fermions. More...
class	cps::FdwfBase
	A class implementing domain wall fermions. More...
class	cps::Fdwf
	A class implementing domain wall fermions. More...
class	cps::GnoneFnone
	Trivial gauge action with no fermions. More...
class	cps::GnoneFasqtad
	Trivial gauge action with staggered fermion action. More...
class	cps::GnoneFp4
	Trivial gauge action with improved staggered fermion action (P4). More...
class	cps::GnoneFstag
	Trivial gauge action with staggered fermion action. More...
class	cps::GnoneFwilson
	Trivial gauge action with wilson fermion action. More...
class	cps::GnoneFclover
	Trivial gauge action with clover Wilson fermion action. More...
class	cps::GnoneFdwf
	Trivial gauge action with domain wall fermion action. More...
class	cps::GwilsonFnone
	Wilson gauge action with no fermions. More...
class	cps::GwilsonFstag
	Wilson gauge action with staggered fermion action. More...
class	cps::GwilsonFasqtad
	Wilson gauge action with staggered fermion action. More...
class	cps::GwilsonFp4
	Wilson gauge action with staggered fermion action. More...
class	cps::GwilsonFwilson
	Wilson gauge action with wilson fermion action. More...
class	cps::GwilsonFclover
	Wilson gauge action with clover Wilson fermion action. More...
class	cps::GwilsonFdwf
	Wilson gauge action with domain wall fermion action. More...
class	cps::GpowerPlaqFnone
	Power plaquette gauge action with no fermions. More...
class	cps::GpowerPlaqFstag
	Power plaquette gauge action with staggered fermion action. More...
class	cps::GpowerPlaqFwilson
	Power plaquette gauge action with Wilson fermion action. More...
class	cps::GpowerPlaqFclover
	Power plaquette gauge action with clover PowerPlaq fermion action. More...
class	cps::GpowerPlaqFdwf
	Power plaquette gauge action with domain wall fermion action. More...
class	cps::GimprRectFnone
	Improved rectangle gauge action with no fermions. More...
class	cps::GimprRectFstag
	Improved rectangle gauge action with staggered fermion action. More...
class	cps::GimprRectFwilson
	Improved rectangle gauge action with wilson fermion action. More...
class	cps::GimprRectFclover
	Improved rectangle gauge action with clover Wilson fermion action. More...
class	cps::GimprRectFdwf
	Improved rectangle gauge action with domain wall fermion action. More...
class	cps::GimprRectFp4
	Improved rectangle gauge action with P4 staggered fermion action. More...
class	cps::GpowerRectFnone
	Power rectangle gauge action with no fermions. More...
class	cps::GpowerRectFstag
	Power rectangle gauge action with staggered fermion action. More...
class	cps::GpowerRectFwilson
	Power rectangle gauge action with powerRect fermion action. More...
class	cps::GpowerRectFclover
	Power rectangle gauge action with clover PowerRect fermion action. More...
class	cps::GpowerRectFdwf
	Power rectangle gauge action with domain wall fermion action. More...
class	cps::GimprOLSymFnone
	One Loop Symanzik improved gauge action with no fermions. More...
class	cps::GimprOLSymFstag
	One Loop Symanzik improved gauge action with staggered fermion action. More...
class	cps::GimprOLSymFwilson
	One Loop Symanzik improved gauge action with wilson fermion action. More...
class	cps::GimprOLSymFclover
	One Loop Symanzik improved gauge action with clover Wilson fermion action. More...
class	cps::GimprOLSymFdwf
	One Loop Symanzik improved gauge action with domain wall fermion action. More...
class	cps::GpowerPlaqFasqtad
	Power plaquette gauge action with Asqtad staggered fermion action. More...
class	cps::GimprRectFasqtad
	Improved rectangle gauge action with Asqtad staggered fermion action. More...
class	cps::GpowerRectFasqtad
	Power rectangle gauge action with Asqtad staggered fermion action. More...
class	cps::GimprOLSymFasqtad
	One Loop Symanzik improved gauge action with asqtad fermion action. More...
class	cps::GimprOLSymFp4
	One Loop Symanzik improved gauge action with Asqtad staggered fermion action. More...
class	cps::GtadpoleRectFp4
	Tadpole-improved rectangle gauge action with p4 staggered fermion action. More...
class	cps::GtadpoleRectFasqtad
	Tadpole-improved rectangle gauge action with asqtad staggered fermion action. More...
class	cps::GtadpoleRectFnone
	Tadpole-improved rectangle gauge action with no fermion action. More...
class	cps::GnoneFwilsonTm
	Trivial gauge action with twisted-mass wilson fermion action. More...
class	cps::GwilsonFwilsonTm
	Trivial gauge action with twisted-mass wilson fermion action. More...
class	cps::GimprRectFwilsonTm
	Trivial gauge action with twisted-mass wilson fermion action. More...
class	cps::Lattice
	The fundamental abstract base class. More...
class	cps::Gnone
	A class implementing a lattice with a zero gauge action. More...
class	cps::Gwilson
	A class implementing a lattice with the standard Wilson plaquette gauge action. More...
class	cps::GpowerPlaq
	A class implementing a lattice with the power-plaquette gauge action. More...
class	cps::GimprRect
	A class implementing a lattice with the plaquette + rectangle gauge action. More...
class	cps::GtadpoleRect
	A class implementing a tadpole-improved plaquette + rectangle gauge action. More...
class	cps::GpowerRect
	A class implementing a lattice with the power-rectangle gauge action. More...
class	cps::GimprOLSym
	A class implementing a lattice with the 1-loop Symanzik improved gauge action. More...
class	cps::Fsmear
	A class for 'improved' actions using smeared links. More...
class	cps::Fnone
	A class implementing a lattice with a zero fermion action. More...
class	cps::FstagTypes
	A class containing methods relevant to all staggered fermion actions. More...
class	cps::Fstag
	A class implementing staggered fermions. More...
class	cps::Fasqtad
	A class implementing improved staggered fermions (the asqtad action). More...
class	cps::Fp4
	A class implementing improved staggered fermions (the P4 action). More...
class	cps::LinkBuffer
	LinkBuffer is a class that buffers the off-node links. More...
struct	cps::list_head
	A list item. More...
class	cps::Mom
	A class to compute momentum phases. More...
class	cps::ThreeMom
class	cps::ParTrans
	A class implementing parallel transports. More...
class	cps::ParTransStagTypes
	A class describing parallel transports for all sorts of staggered fermions. More...
class	cps::ParTransAsqtad
	A class describing the Parallel Transport operator for staggered fermions. More...
class	cps::ParTransStaggered_cb
	A class describing the Parallel Transport operator for staggered fermions. More...
class	cps::ParTransWilsonTypes
	A class describing parallel transports for all sorts of staggered fermions. More...
class	cps::ParTransGauge
	A class describing parallel transports for all sorts of staggered fermions. More...
class	cps::qio_init
	initialize everything needed for QIO More...
class	cps::qio_readLattice
class	cps::qio_readPropagator
class	cps::qio_writeLattice
class	cps::qio_writePropagator
struct	cps::CPS_QIO_UserRecordInfo
struct	cps::CPS_QIO_UserRecordInfoWrapper
struct	cps::CPS_QIO_PROP_FileRecordInfo
struct	cps::CPS_QIO_PROP_UserRecordInfo
struct	cps::CPS_QIO_PROP_PAIRS_UserRecordInfo
struct	cps::CPS_QIO_SOURCE_UserRecordInfo
struct	cps::CPS_QIO_SOURCE_PAIRS_UserRecordInfo
struct	cps::CPS_QIO_PROP_FileRecordInfoWrapper
struct	cps::CPS_QIO_PROP_UserRecordInfoWrapper
struct	cps::CPS_QIO_PROP_PAIRS_UserRecordInfoWrapper
struct	cps::CPS_QIO_SOURCE_UserRecordInfoWrapper
struct	cps::CPS_QIO_SOURCE_PAIRS_UserRecordInfoWrapper
class	cps::QioArg
class	cps::QioControl
class	cps::TempBufAlloc
class	cps::RandomGenerator
	A random number generator generating uniform random numbers in (0,1). More...
class	cps::UniformRandomGenerator
	A random number generator generating uniform random numbers. More...
class	cps::GaussianRandomGenerator
	A random number generator generating gaussian random numbers. More...
class	cps::UGrandomGenerator
	The random number generator for a single 2^4 hypercube in the lattice. More...
class	cps::LatRanGen
	The lattice random number generator. More...
class	cps::LRGState
class	cps::Rcomplex
	A class defining a complex floating point data type. More...
class	cps::ReadLatticeParallel
class	cps::ReadLatticeSerial
class	cps::rfloat
	A floating point type. More...
class	cps::Site
class	cps::Matrix
	A class of general 3x3 complex matrices. More...
class	cps::Vector
	A class implementing a general 3 component complex vector. More...
class	cps::Verbose
	Class to control printing of informational messages. More...
struct	cps::vml_enum_map
struct	cps::vml_discrim
struct	cps::VML
class	cps::GenericEncoder
class	cps::TextEncoder
class	cps::XmlEncoder
class	cps::XdrEncoder
struct	cps::WilsonArg
class	cps::wfm
struct	cps::comm_params
struct	cps::Wilson
	A container of data relevant to the Wilson matrix multiplication. More...
class	cps::WriteLatticeParallel
class	cps::WriteLatticeSerial
union	cps::DoubleBytes
struct	cps::gauge_agg
struct	cps::ConvertArgStruct
	A data container in the layout conversion routines. More...
class	cps::XXX
	A container class for global parameters used in the gauge fixing routines. More...
class	cps::HyperPlane
class	cps::FixHPlane
struct	cps::LinkEntry
	The basic object in the link buffer. More...
Typedefs
typedef float	pooh
typedef double	Float
typedef double	IFloat
typedef Float	FRatVec [MAX_RAT_DEGREE]
typedef int	IMassVec [MAX_HMD_MASSES]
typedef Float	FMassVec [MAX_HMD_MASSES]
typedef FRatVec	FRatMassVec [MAX_HMD_MASSES]
typedef WilsonVector	wilson_vector
typedef cps::BGLCPSTorusStatus_tag	BGL_QUAD_ALIGNSIZE
typedef cps::_BGLCPSTorusPacketSoftHeader_tag	BGL_DWORD_ALIGNSIZE
typedef GLOBALSUM_TYPE	Double64
	A type used (solely?) to accumulate global sums in double precision.
typedef Rcomplex	Complex
	Definition of Complex type.
typedef uint32_t	type32
typedef uint64_t	type64
typedef map< string, string >	GCFHMapParT
typedef VML	VML
typedef bool_t(*	vmlproc_t )(VML *, char *name, void *,...)
typedef void(*	leaf_function )(Lattice &, Matrix &, int *, int, int)
typedef cps::gauge_agg	gauge_agg
typedef cps::ConvertArgStruct	CAS
	A data container in the layout conversion routines.
typedef cps::ConvertArgStruct *	CAP
	A data container in the layout conversion routines.
typedef unsigned	uword
Enumerations
enum	DIR {   X = 0, Y = 1, Z = 2, T = 3,   G5 = -5 }
enum	DENS_LIM { MAX_DENS_MASSES = 100, MAX_DENS_OBS = 100 }
enum	Dir { FRWD = +1, BKWD = -1 }
enum	Quark { QUARK = +1, AQUARK = -1 }
enum	ProjectType {   PPAR = 0, NPAR = 1, PPAR_5Z = 2, NPAR_5Z = 3,   PPAR_5Y = 4, NPAR_5Y = 5, PPAR_5X = 6, NPAR_5X = 7,   PPAR_XY = 8, NPAR_XY = 9, PPAR_5 = 10, NPAR_5 = 11 }
enum	DirType {   DIR_X = 0, DIR_Y = 1, DIR_Z = 2, DIR_T = 3,   DIR_S = 4 }
enum	FclassType {   F_CLASS_NONE = 0, F_CLASS_STAG = 1, F_CLASS_WILSON = 2, F_CLASS_CLOVER = 3,   F_CLASS_DWF = 4, F_CLASS_ASQTAD = 5, F_CLASS_P4 = 6, F_CLASS_WILSON_TM = 7 }
enum	GclassType {   G_CLASS_NONE = 0, G_CLASS_WILSON = 1, G_CLASS_POWER_PLAQ = 2, G_CLASS_IMPR_RECT = 3,   G_CLASS_POWER_RECT = 4, G_CLASS_IMPR_OLSYM = 5, G_CLASS_TADPOLE_RECT = 6 }
enum	StrOrdType {   CANONICAL = 0, STAG = 1, WILSON = 2, G_WILSON_HB = 3,   STAG_BLOCK = 4 }
enum	CnvFrmType { CNV_FRM_NO = 0, CNV_FRM_YES = 1 }
enum	FermionFieldDimension { FOUR_D = 0, FIVE_D = 1 }
enum	PreserveType { PRESERVE_NO = 0, PRESERVE_YES = 1 }
enum	StartConfType {   START_CONF_ORD = 0, START_CONF_DISORD = 1, START_CONF_FILE = 2, START_CONF_LOAD = 3,   START_CONF_MEM = 4 }
enum	StartSeedType {   START_SEED_FIXED = 0, START_SEED_FIXED_UNIFORM = 1, START_SEED = 2, START_SEED_UNIFORM = 3,   START_SEED_INPUT = 4, START_SEED_INPUT_UNIFORM = 5, START_SEED_INPUT_NODE = 6, START_SEED_FILE = 7 }
enum	ChkbType { CHKB_EVEN = 0, CHKB_ODD = 1 }
enum	DagType { DAG_NO = 0, DAG_YES = 1 }
enum	BndCndType { BND_CND_PRD = 0, BND_CND_APRD = 1 }
enum	FixGaugeType {   FIX_GAUGE_NONE = -2, FIX_GAUGE_LANDAU = -1, FIX_GAUGE_COULOMB_X = 0, FIX_GAUGE_COULOMB_Y = 1,   FIX_GAUGE_COULOMB_Z = 2, FIX_GAUGE_COULOMB_T = 3 }
enum	SprojType {   SPROJ_XM = 0, SPROJ_YM = 1, SPROJ_ZM = 2, SPROJ_TM = 3,   SPROJ_XP = 4, SPROJ_YP = 5, SPROJ_ZP = 6, SPROJ_TP = 7 }
enum	SigmaprojType {   SIGMAPROJ_XY = 0, SIGMAPROJ_XZ = 1, SIGMAPROJ_XT = 2, SIGMAPROJ_YZ = 3,   SIGMAPROJ_YT = 4, SIGMAPROJ_YX = 5, SIGMAPROJ_ZT = 6, SIGMAPROJ_ZX = 7,   SIGMAPROJ_ZY = 8, SIGMAPROJ_TX = 9, SIGMAPROJ_TY = 10, SIGMAPROJ_TZ = 11 }
enum	RitzMatType {   NONE = 0, MAT_HERM = 1, MATPC_HERM = 2, MATPCDAG_MATPC = 3,   NEG_MATPCDAG_MATPC = 4, MATDAG_MAT = 5, NEG_MATDAG_MAT = 6, MATDAG_MAT_NORM = 7,   NEG_MATDAG_MAT_NORM = 8 }
enum	RatApproxType { CONSTANT = 0, DYNAMIC = 1 }
enum	MultiShiftSolveType { SINGLE = 0, MULTI = 1, GENERAL = 2 }
enum	MassRenormaliseDir { RENORM_BACKWARDS = 0, RENORM_FORWARDS = 1 }
enum	FieldType { FERMION = 0, BOSON = 1 }
enum	RatType { RATIONAL_STANDARD = 0, RATIONAL_QUOTIENT = 1, RATIONAL_SPLIT = 2 }
enum	WbaryonFold { BARYON_FOLD = 0, BARYON_RAW = 1, BARYON_PAST = 2 }
enum	SourceKind {   POINT_W = 0, WALL_W = 0 + 1, BOX_W = 0 + 2, JACOBI_W = 0 + 3,   MAX_NUM_SINK = 0 + 4, Z2 = 0 + 5, COMPLEX_Z2 = 0 + 6, KURAMASHI = 0 + 7 }
enum	SinkKind { W_POINT = 0, W_WALL = 1, W_BOX = 2 }
enum	MomentumKind {   MOM_000 = 0, MOM_001 = 0 + 1, MOM_002 = 0 + 2, MOM_011 = 0 + 3,   MOM_022 = 0 + 4, MOM_111 = 0 + 5, MOM_222 = 0 + 6, MAX_NUM_MOMENTA = 0 + 7 }
enum	DEVOperatorKind {   UNIT = 0, DEV1 = 0 + 1, DEV2 = 0 + 2, DEV3 = 0 + 3,   DEV1DEV2 = 0 + 4, DEV2DEV1 = 0 + 5, DEV2DEV3 = 0 + 6, DEV3DEV2 = 0 + 7,   DEV1DEV3 = 0 + 8, DEV3DEV1 = 0 + 9, DEV1DEV1 = 0 + 10, DEV2DEV2 = 0 + 11,   DEV3DEV3 = 0 + 12, DEV_OP_NUM = 0 + 13, SUM_F = 0 + 14, SUM_S_ANTISYM = 0 + 15,   SUM_S_SYM = 0 + 16, SUM_S_DIAG = 0 + 17, SUM_F_S_ANTISYM = 0 + 18, SUM_S_SYM_DIAG = 0 + 19,   SUM_UNIT_F_S_ANTISYM = 0 + 20, END_SUM_OP = 0 + 21, BEGIN_BE_OP = 0 + 22, FB1_OP = 0,   FB2_OP = 0 + 1, FB3_OP = 0 + 2, FE1_OP = 0 + 3, FE2_OP = 0 + 4,   FE3_OP = 0 + 5, FUNIT_OP = 0 + 6, SUM_MAGN_OP = 0 + 7, SUM_ELEC_OP = 0 + 8,   SUM_MAGN_ELEC_OP = 0 + 9, END_BE_OP = 0 + 10 }
enum	WMesonOpKind {   MO_a0xP_x = 0, MO_a0xP_y = 1, MO_a0xP_z = 2, MO_pionxP_x = 3,   MO_pionxP_y = 4, MO_pionxP_z = 5, MO_a0_primexP_x = 6, MO_a0_primexP_y = 7,   MO_a0_primexP_z = 8, MO_rhoxP_A1 = 9, MO_rhoxP_T1_x = 10, MO_rhoxP_T1_y = 11,   MO_rhoxP_T1_z = 12, MO_rhoxP_T2_x = 13, MO_rhoxP_T2_y = 14, MO_rhoxP_T2_z = 15,   MO_a1xP_A1 = 16, MO_a1xP_T2_x = 17, MO_a1xP_T2_y = 18, MO_a1xP_T2_z = 19,   MO_a1xP_E_1 = 20, MO_a1xP_E_2 = 21, MO_b1xP_T1_x = 22, MO_b1xP_T1_y = 23,   MO_b1xP_T1_z = 24, MO_b1xD_A2 = 25, MO_b1xD_T1_x = 26, MO_b1xD_T1_y = 27,   MO_b1xD_T1_z = 28, MO_b1xD_T2_x = 29, MO_b1xD_T2_y = 30, MO_b1xD_T2_z = 31,   MO_b1xD_E_1 = 32, MO_b1xD_E_2 = 33, MO_a0_primexD_x = 34, MO_a0_primexD_y = 35,   MO_a0_primexD_z = 36, MO_rhoxB_T1_x = 37, MO_rhoxB_T1_y = 38, MO_rhoxB_T1_z = 39,   MO_rhoxB_T2_x = 40, MO_rhoxB_T2_y = 41, MO_rhoxB_T2_z = 42, MO_a1xB_A1 = 43,   MO_a1xB_T1_x = 44, MO_a1xB_T1_y = 45, MO_a1xB_T1_z = 46, MO_a1xB_T2_x = 47,   MO_a1xB_T2_y = 48, MO_a1xB_T2_z = 49, MO_a1xD_A2 = 50, MO_a1xD_T1_x = 51,   MO_a1xD_T1_y = 52, MO_a1xD_T1_z = 53, MO_a1xD_T2_x = 54, MO_a1xD_T2_y = 55,   MO_a1xD_T2_z = 56, MO_a1xD_E_1 = 57, MO_a1xD_E_2 = 58, MO_rhoxD_A2 = 59,   MO_rhoxD_T1_x = 60, MO_rhoxD_T1_y = 61, MO_rhoxD_T1_z = 62, MO_rhoxD_T2_x = 63,   MO_rhoxD_T2_y = 64, MO_rhoxD_T2_z = 65, MO_pionxB_T1_x = 66, MO_pionxB_T1_y = 67,   MO_pionxB_T1_z = 68, MO_pionxD_T2_x = 69, MO_pionxD_T2_y = 70, MO_pionxD_T2_z = 71,   NUM_WMESON_OP_KIND = 72 }
enum	WMesonState {   MS_a0xP_x = 0, MS_a0xP_y = 1, MS_a0xP_z = 2, MS_pionxP_x = 3,   MS_pionxP_y = 4, MS_pionxP_z = 5, MS_a0_primexP_x = 6, MS_a0_primexP_y = 7,   MS_a0_primexP_z = 8, MS_rhoxP_A1_1 = 9, MS_rhoxP_T1_x = 10, MS_rhoxP_T1_y = 11,   MS_rhoxP_T1_z = 12, MS_rhoxP_T2_x = 13, MS_rhoxP_T2_y = 14, MS_rhoxP_T2_z = 15,   MS_a1xP_A1_1 = 16, MS_a1xP_T2_x = 17, MS_a1xP_T2_y = 18, MS_a1xP_T2_z = 19,   MS_a1xP_E_1 = 20, MS_a1xP_E_2 = 21, MS_b1xP_T1_x = 22, MS_b1xP_T1_y = 23,   MS_b1xP_T1_z = 24, MS_b1xD_A2_1 = 25, MS_b1xD_T1_x = 26, MS_b1xD_T1_y = 27,   MS_b1xD_T1_z = 28, MS_b1xD_T2_x = 29, MS_b1xD_T2_y = 30, MS_b1xD_T2_z = 31,   MS_b1xD_E_1 = 32, MS_b1xD_E_2 = 33, MS_a0_primexD_x = 34, MS_a0_primexD_y = 35,   MS_a0_primexD_z = 36, MS_rhoxB_T1_x = 37, MS_rhoxB_T1_y = 38, MS_rhoxB_T1_z = 39,   MS_rhoxB_T2_x = 40, MS_rhoxB_T2_y = 41, MS_rhoxB_T2_z = 42, MS_a1xB_A1_1 = 43,   MS_a1xB_T1_x = 44, MS_a1xB_T1_y = 45, MS_a1xB_T1_z = 46, MS_a1xB_T2_x = 47,   MS_a1xB_T2_y = 48, MS_a1xB_T2_z = 49, MS_a1xD_A2_1 = 50, MS_a1xD_T1_x = 51,   MS_a1xD_T1_y = 52, MS_a1xD_T1_z = 53, MS_a1xD_T2_x = 54, MS_a1xD_T2_y = 55,   MS_a1xD_T2_z = 56, MS_a1xD_E_1 = 57, MS_a1xD_E_2 = 58, MS_rhoxD_A2_1 = 59,   MS_rhoxD_T1_x = 60, MS_rhoxD_T1_y = 61, MS_rhoxD_T1_z = 62, MS_rhoxD_T2_x = 63,   MS_rhoxD_T2_y = 64, MS_rhoxD_T2_z = 65, MS_pionxB_T1_x = 66, MS_pionxB_T1_y = 67,   MS_pionxB_T1_z = 68, MS_pionxD_T2_x = 69, MS_pionxD_T2_y = 70, MS_pionxD_T2_z = 71,   NUM_WMESON_STATE = 72 }
enum	WMesonOutputName {   a0xP = 0, pionxP = 1, a0_primexP = 2, rhoxP_A1 = 3,   rhoxP_T1 = 4, rhoxP_T2 = 5, a1xP_A1 = 6, a1xP_T2 = 7,   a1xP_E = 8, b1xP_T1 = 9, b1xD_A2 = 10, b1xD_T1 = 11,   b1xD_T2 = 12, b1xD_E = 13, a0_primexD = 14, rhoxB_T1 = 15,   rhoxB_T2 = 16, a1xB_A1 = 17, a1xB_T1 = 18, a1xB_T2 = 19,   a1xD_A2 = 20, a1xD_T1 = 21, a1xD_T2 = 22, a1xD_E = 23,   rhoxD_A2 = 24, rhoxD_T1 = 25, rhoxD_T2 = 26, pionxB_T1 = 27,   pionxD_T2 = 28, NUM_WMESON_OUTPUT = 29 }
enum	WMesonCategory {   NORMALMESON = 0, EXT_FIRSTDEV_MESON = 1, EXT_SECONDDEV_SYM_MESON = 2, EXT_SECONDDEV_ANTISYM_MESON = 3,   EXT_SECONDDEV_DIAG_MESON = 4, MIXING = 5 }
enum	WExtMesonBEOutputName { BE_pionxB = 0, BE_rhoxB_T1 = 0 + 1, NUM_WEXTMESON_BE_OUTPUT = 0 + 2 }
enum	WExtMesonBEState {   BE_MS_pionxB_x = 0, BE_MS_pionxB_y = 0 + 1, BE_MS_pionxB_z = 0 + 2, BE_MS_rhoxB_T1_x = 0 + 3,   BE_MS_rhoxB_T1_y = 0 + 4, BE_MS_rhoxB_T1_z = 0 + 5, NUM_WEXTMESON_BE_STATES = 0 + 6 }
enum	WExtMesonBEOp {   BE_MO_pionxB_x = 0, BE_MO_pionxB_y = 0 + 1, BE_MO_pionxB_z = 0 + 2, BE_MO_rhoxB_T1_x = 0 + 3,   BE_MO_rhoxB_T1_y = 0 + 4, BE_MO_rhoxB_T1_z = 0 + 5, NUM_WEXTMESON_BE_OPS = 0 + 6 }
enum	WExtMesonBECategory { ELEC_HYBRID_BE = 0, MAG_HYBRID_BE = 0 + 1, MIXING_BE = 0 + 2 }
enum	FieldTensorId {   FB1 = 0, FB2 = 0 + 1, FB3 = 0 + 2, FE1 = 0 + 3,   FE2 = 0 + 4, FE3 = 0 + 5, NUM_FLDS = 0 + 6, FUNIT = 0 + 7,   SUM_MAGN = 0 + 8, SUM_ELEC = 0 + 9, SUM_MAGN_ELEC = 0 + 10, NUM_FLD_OPS = 0 + 11 }
enum	PatternType { LIN = 0, ARRAY = 0 + 1, LOG = 0 + 2, FLOW = 0 + 3 }
enum	IntegratorType {   INT_LEAP = 0, INT_OMELYAN = 0 + 1, INT_CAMPOSTRINI = 0 + 2, INT_OMELYAN_44 = 0 + 3,   INT_OMELYAN_45 = 0 + 4, INT_SUM = 0 + 5, INT_MOM = 0 + 6, INT_GAUGE = 0 + 7,   INT_FERMION = 0 + 8, INT_BOSON = 0 + 9, INT_QUOTIENT = 0 + 10, INT_RATIONAL = 0 + 11,   INT_RATIONAL_SPLIT = 0 + 12, INT_RATIONAL_QUOTIENT = 0 + 13 }
enum	IntegratorLevel { EMBEDDED_INTEGRATOR = 0, TOP_LEVEL_INTEGRATOR = 0 + 1 }
enum	ReunitarizeType { REUNITARIZE_NO = 0, REUNITARIZE_YES = 1 }
enum	ReproduceTest { REPRODUCE_NO = 0, REPRODUCE_YES = 1 }
enum	TestReproduceTest { TEST_REPRODUCE_NO = 0, TEST_REPRODUCE_YES = 1 }
enum	ReverseTest { REVERSE_NO = 0, REVERSE_YES = 1 }
enum	MetropolisType { METROPOLIS_NO = 0, METROPOLIS_YES = 1 }
enum	ForceMeasure { FORCE_MEASURE_NO = 0, FORCE_MEASURE_YES = 1 }
enum	EigenMeasure { EIGEN_MEASURE_NO = 0, EIGEN_MEASURE_YES = 1 }
enum	RhmcPolesAction { RHMC_POLES_CALC = 0, RHMC_POLES_READ = 1, RHMC_POLES_CALC_WRITE = 2 }
enum	HmdLimits { MAX_HMD_MASSES = 10, MAX_RAT_DEGREE = 20 }
enum	InverterType { CG = 0, BICGSTAB = 1 }
enum	RationalApproxType { RATIONAL_APPROX_POWER = 0, RATIONAL_APPROX_QUOTIENT = 1, RATIONAL_APPROX_ZERO_POLE = 2 }
enum	RationalBoundsType { RATIONAL_BOUNDS_AUTOMATIC = 0, RATIONAL_BOUNDS_MANUAL = 1 }
enum	StaticBActionLinkSmearType {   SB_ALS_NONE = 0, SB_ALS_APE = 1, SB_ALS_APE_NO_PROJ = 2, SB_ALS_APE_OLEG = 3,   SB_ALS_HYP_HK = 4, SB_ALS_HYP_L = 5, SB_ALS_HYP_2 = 6, SB_ALS_STOUT = 7 }
enum	GaussianKernelLinkSmearType { GKLS_NONE = 0, GKLS_APE = 1, GKLS_STOUT = 2 }
enum	InstType {   SINGULAR = 0, REGULAR = 1, REGULAR_TRANSFORMED = 2, REGULAR_SQUASHED = 3,   REGULAR_SQUASHED_TRANSFORMED = 4, CONSTANT_FIELD = 5 }
enum	InstMethod { ADD = 0, DESTROY = 1 }
enum	MeasLimits { MAX_MEAS_TASK = 24 }
enum	MeasType {   MeasAlgPlaq = 0, MeasAlgPbp = 1, MeasAlgWspect = 2, MeasAlgEig = 3,   MeasAlgPot = 4, MeasAlgFixGauge = 5, MeasAlgFixGaugeFree = 6 }
enum	MeasIOTask { MeasIOLoad = 0, MeasIOSave = 1, MeasIONone = 2 }
enum	{ VECT_LEN = 6, MATRIX_SIZE = 18 }
enum	HadronType {   SMESON, SMOMMESON, SNUCLEON, SNONLOCAL,   NLSTAG }
enum	NoiseType { GAUSSIAN = 0, FLAT = 1 }
enum	NucOp { NUC_C, NUC_G5C }
enum	PBP_LIM { MAX_PBP_MASSES = 100 }
enum	SourceType {   POINT = 0, VOLUME = 1, WALL = 2, BOX = 3,   RANDVOLUME = 4, RANDWALL = 5, RANDSLAB = 6, MESSEQ = 7,   PROT_U_SEQ = 8, PROT_D_SEQ = 9, UNDEF = 10, DERIV = 11,   GAUSS_GAUGE_INV = 12, EXP = 13, SUM_MOM = 14, FL_FUNC = 15,   MOM = 16 }
enum	RandomType { GAUSS = 0, UONE = 1, ZTWO = 2, NORAND = 3 }
enum	{ MAXNUMQP = 100 }
enum	StagQuarkSrcType { S_QUARK_POINT = 0, WALLZ = 1, WALL2Z = 2 }
enum	StagQuarkLocalType { LOCAL = 0, NONLOCAL = 1 }
enum	StagQuarkDir { HDM_X = 0, HDM_Y = 1, HDM_Z = 2, HDM_T = 3 }
enum	{ SPINS = 4 }
enum	WGammaMatrix {   WUNIT = 0, WGAM_1 = 1, WGAM_2 = 2, WGAM_3 = 4,   WGAM_4 = 8, WGAM_5 = 15, WGAM_1_2 = 3, WGAM_1_3 = 5,   WGAM_1_4 = 9, WGAM_1_5 = 14, WGAM_2_3 = 6, WGAM_2_4 = 10,   WGAM_5_2 = 13, WGAM_3_4 = 12, WGAM_3_5 = 11, WGAM_5_4 = 7 }
enum	MesonLimits { NumMesonChannels = 16 }
enum	Type_tag { TYPE_IFloat, TYPE_int }
	Flags to identify portable data types. More...
enum	SCUDir {   SCU_TP, SCU_TM, SCU_XP, SCU_XM,   SCU_YP, SCU_YM, SCU_ZP, SCU_ZM,   SCU_SP, SCU_SM, SCU_NoDir = -1 }
	Definition of the physical directions. More...
enum	SCUAxis {   SCU_T, SCU_X, SCU_Y, SCU_Z,   SCU_S, SCU_NoAxis = -1 }
	Definition of the physical axes. More...
enum	SCUXR { SCU_REC, SCU_SEND = 8, SCU_NoXR = -1 }
	Flags denoting 'send' and 'receive' in communications routines. More...
enum	CsumType {   CSUM_EVL_LAT, CSUM_EVL_MOM, CSUM_GLB_LOC, CSUM_GLB_SUM,   CSUM_EVL_SRC, CSUM_EVL_SOL, CSUM_MMP_SUM, CSUM_EVL_MMP,   CSUM_ALL }
enum	MAT_INV_ALG { MAT_INV_ALG_LDL, MAT_INV_ALG_LDL_CMPR }
enum	FP_FORMAT {   FP_UNKNOWN = 0, FP_AUTOMATIC, FP_TIDSP32, FP_IEEE32,   FP_IEEE32BIG, FP_IEEE32LITTLE, FP_IEEE64, FP_IEEE64BIG,   FP_IEEE64LITTLE }
enum	GsumReduceType { SumReduce, MinReduce, MaxReduce }
enum	INT_FORMAT { INT_UNKNOWN = 0, INT_AUTOMATIC, INT_32BIG, INT_32LITTLE }
enum	{ NEW = 0, INITTED }
enum	LatDataAlloc { DEFAULT = 0, FAST = 1 }
enum	FileIoType { ZERO_ONLY, ADD_ID, ALL_NODES }
	Type of IO. More...
enum	QIO_PROP_SOURCE_TYPES { QIO_UNKNOWN_SOURCE = 0, QIO_SCALAR_SOURCE, QIO_FULL_SOURCE }
	source types More...
enum	{ COLORS = 3 }
	The rank of the matrices represented by the Matrix class. More...
enum	VerboseLevelType {   VERBOSE_NONE_LEVEL, VERBOSE_WARN_LEVEL, VERBOSE_RESULT_LEVEL, VERBOSE_PMALLOC_LEVEL,   VERBOSE_SMALLOC_LEVEL = VERBOSE_PMALLOC_LEVEL, VERBOSE_FUNC_LEVEL, VERBOSE_FLOW_LEVEL, VERBOSE_INPUT_LEVEL,   VERBOSE_DEBUG_LEVEL, VERBOSE_FUNC_CLOCK_LEVEL, VERBOSE_FLOW_CLOCK_LEVEL, VERBOSE_CLOCK_LEVEL,   VERBOSE_LED_LEVEL, VERBOSE_RNGSEED_LEVEL, N_VERBOSE_LEVELS }
	Definition of the types of message, related to various aspects of code activity. More...
enum	vml_op { VML_ENCODE = 0, VML_DECODE = 1, VML_FREE = 2 }
enum	vml_type { VML_MEM, VML_DESCRIPTOR, VML_STDIO }
enum	vml_markup { VML_TEXT, VML_XML, VML_XDR }
enum	{ MATRIX_SIZE = 18 }
enum	{   VECT_LEN = 6, VECT_LEN2 = 6, MATRIX_SIZE = 18, SITE_LEN = 72,   NUM_DIR = 8 }
enum	{   LINK_SIZE = 18, CLOVER_MAT_SIZE = 72, HALF_CLOVER_MAT_SIZE = 36, HALF_CLOVER_MAT_RANK = 6,   HALF_LINK_MAT_SIZE = 9 }
enum	{   LINK_SIZE = 18, CLOVER_MAT_SIZE = 72, HALF_CLOVER_MAT_SIZE = 36, HALF_CLOVER_MAT_RANK = 6,   HALF_LINK_MAT_SIZE = 9 }
enum	{   VECT_LEN = 6, VECT_LEN2 = 6, MATRIX_SIZE = 18, SITE_LEN = 72,   NUM_DIR = 8, N = 4 }
enum	{   VECT_LEN = 6, VECT_LEN2 = 6, MATRIX_SIZE = 18, SITE_LEN = 72,   NUM_DIR = 8, N = 4 }
enum	{ VECT_LEN = 6, MATRIX_SIZE = 18, SITE_LEN = 72 }
enum	{ VECT_LEN = 6, MATRIX_SIZE = 18, SITE_LEN = 72, NUM_DIR = 8 }
enum	{ NUM_DIR = 8, POS_DIR = 4 }
enum	{ CLOVER_MAT_SIZE = 72, HALF_CLOVER_MAT_SIZE = 36 }
enum	{ NUM_DIR = 8, POS_DIR = 4 }
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18 }
	The number of floating point numbers in an SU(3) matrix. More...
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18 }
	The number of floating point numbers in a 3x3 complex matrix. More...
enum	{ NUM_SPACE_PLAQ = 3, NUM_TIME_PLAQ = 3, NUM_COLORS = 3, NUM_DIM = 4 }
enum	{ NUM_SPACE_RECT = 6, NUM_TIME_RECT = 3 }
enum	{ MATRIX_SIZE = 18 }
enum	{ MATRIX_SIZE = 18, NUM_DIR = 8, VECT_LEN = 6 }
Functions
void	three_staple (Lattice &latt, Matrix &link, int *pos, int u, int orth)
	Calculates the three-link staple around a link.
void	five_staple (Lattice &latt, Matrix &link, int *pos, int u, int orth)
	Calculates the five-link staple around a link.
void	seven_staple (Lattice &latt, Matrix &link, int *pos, int u, int orth)
	Calculates the seven-link staple around a link.
void	lepage_staple (Lattice &latt, Matrix &link, int *pos, int u, int orth)
	Calculates the lepage staple around a link.
int	su3_proj (Matrix &x, Float tolerance)
	Projects a matrix on to the SU(3) manifold.
void	three_staple2 (Lattice &latt, Matrix &link, int *pos, int u, int orth)
	Calculates the three-link staple around a link.
bool_t	vml_ApeSmearArg (VML *, char *instance, ApeSmearArg *)
bool_t	vml_FloatArray (VML *, char *instance, FloatArray *)
bool_t	vml_ParamArg (VML *, char *instance, ParamArg *)
bool_t	vml_ParamArray (VML *, char *instance, ParamArray *)
bool_t	vml_CgArg (VML *, char *instance, CgArg *)
bool_t	vml_DENS_LIM (VML *, char *instance, DENS_LIM *)
bool_t	vml_DensArg (VML *, char *instance, DensArg *)
bool_t	vml_BGLAxisMap (VML *, char *instance, BGLAxisMap *)
bool_t	vml_DoArg (VML *, char *instance, DoArg *)
bool_t	vml_EigArg (VML *, char *instance, EigArg *)
bool_t	vml_pooh (VML *, char *instance, pooh *)
bool_t	vml_Float (VML *, char *instance, Float *)
bool_t	vml_IFloat (VML *, char *instance, IFloat *)
bool_t	vml_DirType (VML *, char *instance, DirType *)
bool_t	vml_FclassType (VML *, char *instance, FclassType *)
bool_t	vml_GclassType (VML *, char *instance, GclassType *)
bool_t	vml_StrOrdType (VML *, char *instance, StrOrdType *)
bool_t	vml_CnvFrmType (VML *, char *instance, CnvFrmType *)
bool_t	vml_FermionFieldDimension (VML *, char *instance, FermionFieldDimension *)
bool_t	vml_PreserveType (VML *, char *instance, PreserveType *)
bool_t	vml_StartConfType (VML *, char *instance, StartConfType *)
bool_t	vml_StartSeedType (VML *, char *instance, StartSeedType *)
bool_t	vml_ChkbType (VML *, char *instance, ChkbType *)
bool_t	vml_DagType (VML *, char *instance, DagType *)
bool_t	vml_BndCndType (VML *, char *instance, BndCndType *)
bool_t	vml_FixGaugeType (VML *, char *instance, FixGaugeType *)
bool_t	vml_SprojType (VML *, char *instance, SprojType *)
bool_t	vml_SigmaprojType (VML *, char *instance, SigmaprojType *)
bool_t	vml_RitzMatType (VML *, char *instance, RitzMatType *)
bool_t	vml_RatApproxType (VML *, char *instance, RatApproxType *)
bool_t	vml_MultiShiftSolveType (VML *, char *instance, MultiShiftSolveType *)
bool_t	vml_MassRenormaliseDir (VML *, char *instance, MassRenormaliseDir *)
bool_t	vml_FieldType (VML *, char *instance, FieldType *)
bool_t	vml_RatType (VML *, char *instance, RatType *)
bool_t	vml_WbaryonFold (VML *, char *instance, WbaryonFold *)
bool_t	vml_SourceKind (VML *, char *instance, SourceKind *)
bool_t	vml_SinkKind (VML *, char *instance, SinkKind *)
bool_t	vml_MomentumKind (VML *, char *instance, MomentumKind *)
bool_t	vml_DEVOperatorKind (VML *, char *instance, DEVOperatorKind *)
bool_t	vml_WMesonOpKind (VML *, char *instance, WMesonOpKind *)
bool_t	vml_WMesonState (VML *, char *instance, WMesonState *)
bool_t	vml_WMesonOutputName (VML *, char *instance, WMesonOutputName *)
bool_t	vml_WMesonCategory (VML *, char *instance, WMesonCategory *)
bool_t	vml_WExtMesonBEOutputName (VML *, char *instance, WExtMesonBEOutputName *)
bool_t	vml_WExtMesonBEState (VML *, char *instance, WExtMesonBEState *)
bool_t	vml_WExtMesonBEOp (VML *, char *instance, WExtMesonBEOp *)
bool_t	vml_WExtMesonBECategory (VML *, char *instance, WExtMesonBECategory *)
bool_t	vml_FieldTensorId (VML *, char *instance, FieldTensorId *)
bool_t	vml_PatternType (VML *, char *instance, PatternType *)
bool_t	vml_IntegratorType (VML *, char *instance, IntegratorType *)
bool_t	vml_IntegratorLevel (VML *, char *instance, IntegratorLevel *)
bool_t	vml_ReunitarizeType (VML *, char *instance, ReunitarizeType *)
bool_t	vml_ReproduceTest (VML *, char *instance, ReproduceTest *)
bool_t	vml_TestReproduceTest (VML *, char *instance, TestReproduceTest *)
bool_t	vml_ReverseTest (VML *, char *instance, ReverseTest *)
bool_t	vml_MetropolisType (VML *, char *instance, MetropolisType *)
bool_t	vml_ForceMeasure (VML *, char *instance, ForceMeasure *)
bool_t	vml_EigenMeasure (VML *, char *instance, EigenMeasure *)
bool_t	vml_RhmcPolesAction (VML *, char *instance, RhmcPolesAction *)
bool_t	vml_HmdLimits (VML *, char *instance, HmdLimits *)
bool_t	vml_InverterType (VML *, char *instance, InverterType *)
bool_t	vml_RationalApproxType (VML *, char *instance, RationalApproxType *)
bool_t	vml_RationalBoundsType (VML *, char *instance, RationalBoundsType *)
bool_t	vml_StaticBActionLinkSmearType (VML *, char *instance, StaticBActionLinkSmearType *)
bool_t	vml_GaussianKernelLinkSmearType (VML *, char *instance, GaussianKernelLinkSmearType *)
bool_t	vml_FixGaugeArg (VML *, char *instance, FixGaugeArg *)
bool_t	vml_GhbArg (VML *, char *instance, GhbArg *)
bool_t	vml_HmcArg (VML *, char *instance, HmcArg *)
bool_t	vml_FRatVec (VML *, char *instance, FRatVec)
bool_t	vml_IMassVec (VML *, char *instance, IMassVec)
bool_t	vml_FMassVec (VML *, char *instance, FMassVec)
bool_t	vml_FRatMassVec (VML *, char *instance, FRatMassVec)
bool_t	vml_HmdArg (VML *, char *instance, HmdArg *)
bool_t	vml_EvoArg (VML *, char *instance, EvoArg *)
bool_t	vml_RhmcPolesState (VML *, char *instance, RhmcPolesState *)
bool_t	vml_HypSmearArg (VML *, char *instance, HypSmearArg *)
bool_t	vml_IntABArg (VML *, char *instance, IntABArg *)
bool_t	vml_ActionArg (VML *, char *instance, ActionArg *)
bool_t	vml_BilinearDescr (VML *, char *instance, BilinearDescr *)
bool_t	vml_ActionBilinearArg (VML *, char *instance, ActionBilinearArg *)
bool_t	vml_ApproxDescr (VML *, char *instance, ApproxDescr *)
bool_t	vml_RationalDescr (VML *, char *instance, RationalDescr *)
bool_t	vml_EigenDescr (VML *, char *instance, EigenDescr *)
bool_t	vml_ActionRationalArg (VML *, char *instance, ActionRationalArg *)
bool_t	vml_SplitRange (VML *, char *instance, SplitRange *)
bool_t	vml_ActionRationalSplitArg (VML *, char *instance, ActionRationalSplitArg *)
bool_t	vml_BosonDescr (VML *, char *instance, BosonDescr *)
bool_t	vml_ActionBosonArg (VML *, char *instance, ActionBosonArg *)
bool_t	vml_FermionDescr (VML *, char *instance, FermionDescr *)
bool_t	vml_ActionFermionArg (VML *, char *instance, ActionFermionArg *)
bool_t	vml_QuotientDescr (VML *, char *instance, QuotientDescr *)
bool_t	vml_ActionQuotientArg (VML *, char *instance, ActionQuotientArg *)
bool_t	vml_ActionRationalQuotientArg (VML *, char *instance, ActionRationalQuotientArg *)
bool_t	vml_ActionGaugeArg (VML *, char *instance, ActionGaugeArg *)
bool_t	vml_KineticSmearArg (VML *, char *instance, KineticSmearArg *)
bool_t	vml_MeasLimits (VML *, char *instance, MeasLimits *)
bool_t	vml_MeasType (VML *, char *instance, MeasType *)
bool_t	vml_MeasIOTask (VML *, char *instance, MeasIOTask *)
bool_t	vml_MeasTask (VML *, char *instance, MeasTask *)
bool_t	vml_MeasArg (VML *, char *instance, MeasArg *)
bool_t	vml_MomArg (VML *, char *instance, MomArg *)
bool_t	vml_NoiseType (VML *, char *instance, NoiseType *)
bool_t	vml_NoiseArg (VML *, char *instance, NoiseArg *)
bool_t	vml_Nuc3ptArg (VML *, char *instance, Nuc3ptArg *)
bool_t	vml_PBP_LIM (VML *, char *instance, PBP_LIM *)
bool_t	vml_PbpArg (VML *, char *instance, PbpArg *)
bool_t	vml_PotArg (VML *, char *instance, PotArg *)
bool_t	vml_SourceType (VML *, char *instance, SourceType *)
bool_t	vml_RandomType (VML *, char *instance, RandomType *)
bool_t	vml_QPropWArg (VML *, char *instance, QPropWArg *)
bool_t	vml_QPropWGFArg (VML *, char *instance, QPropWGFArg *)
bool_t	vml_QPropWPointArg (VML *, char *instance, QPropWPointArg *)
bool_t	vml_QPropWBoxArg (VML *, char *instance, QPropWBoxArg *)
bool_t	vml_QPropWRandArg (VML *, char *instance, QPropWRandArg *)
bool_t	vml_QPropWSlabArg (VML *, char *instance, QPropWSlabArg *)
bool_t	vml_QPropWExpArg (VML *, char *instance, QPropWExpArg *)
bool_t	vml_QPropWGaussArg (VML *, char *instance, QPropWGaussArg *)
bool_t	vml_StagQuarkSrcType (VML *, char *instance, StagQuarkSrcType *)
bool_t	vml_StagQuarkLocalType (VML *, char *instance, StagQuarkLocalType *)
bool_t	vml_StagQuarkDir (VML *, char *instance, StagQuarkDir *)
bool_t	vml_StagQuarkSrc (VML *, char *instance, StagQuarkSrc *)
bool_t	vml_StagQuarkArg (VML *, char *instance, StagQuarkArg *)
bool_t	vml_StagMesonArg (VML *, char *instance, StagMesonArg *)
bool_t	vml_StagMomMesonArg (VML *, char *instance, StagMomMesonArg *)
bool_t	vml_StagNucleonArg (VML *, char *instance, StagNucleonArg *)
bool_t	vml_StagNonLocalArg (VML *, char *instance, StagNonLocalArg *)
bool_t	vml_NLStagMesonArg (VML *, char *instance, NLStagMesonArg *)
bool_t	vml_MesonLimits (VML *, char *instance, MesonLimits *)
bool_t	vml_WspectOutput (VML *, char *instance, WspectOutput *)
bool_t	vml_WspectArg (VML *, char *instance, WspectArg *)
WilsonMatrix	operator * (const WilsonMatrix &lhs, const WilsonMatrix &rhs)
	times operator
WilsonMatrix	operator * (const Float &num, const WilsonMatrix &mat)
	times operator
WilsonMatrix	operator * (const WilsonMatrix &mat, const Float &num)
	times operator
WilsonMatrix	operator * (const Rcomplex &num, const WilsonMatrix &mat)
	times operator
WilsonMatrix	operator * (const WilsonMatrix &mat, const Rcomplex &num)
	times operator
WilsonMatrix	operator+ (const WilsonMatrix &lhs, const WilsonMatrix &rhs)
	plus operator
WilsonMatrix	operator- (const WilsonMatrix &lhs, const WilsonMatrix &rhs)
	minus operator
void	mult_by_gamma_left (int dir, const wilson_matrix &src, wilson_matrix &dest)
	left multiply by gamma_dir
void	mult_by_gamma_right (int dir, const wilson_matrix &src, wilson_matrix &dest)
	right multiply by gamma_dir
Rcomplex	Trace (const WilsonMatrix &p1, const WilsonMatrix &p2)
	Spin and Color trace of a 2 WilsonMatrices.
Matrix	SpinTrace (const WilsonMatrix &Wmat)
	Spin trace of a WilsonMatrix.
Matrix	SpinTrace (const WilsonMatrix &Wmat, const WilsonMatrix &Wmat2)
	Spin trace of two WilsonMatrices.
Matrix	SpinTrace (const WilsonMatrix &Wmat, const WilsonMatrix &Wmat2, const WilsonMatrix &Wmat3)
	Spin trace of two WilsonMatrices.
SpinMatrix	ColorTrace (const WilsonMatrix &Wmat)
	Color trace of a WilsonMatrix.
SpinMatrix	ColorTrace (const WilsonMatrix &Wmat, const WilsonMatrix &Wmat2)
	Color trace of three WilsonMatrices.
SpinMatrix	ColorTrace (const WilsonMatrix &Wmat, const WilsonMatrix &Wmat2, const WilsonMatrix &Wmat3)
	Color trace of three WilsonMatrices.
Rcomplex	Tr (const Matrix &a, const Matrix &b)
	trace of two (color) Matrices
Rcomplex	Tr (const SpinMatrix &a, const SpinMatrix &b)
	trace of two SpinMatrices
void	BGLGlobalTreeBarrier (void)
void	BGLCPSTorusPacketHeader_Init (BGLCPSTorusPacketHeader *h, int hxp, int hxm, int hyp, int hym, int hzp, int hzm, int x, int y, int z, int fifo_id, int size)
void	BGLCPSTorus_send (int dir, int size, IFloat *data)
void	BGLCPSTorus_recv (int dir, int size, IFloat *data)
void	BGLCPSTorus_send_spinor (int dir, BGLQuad *data)
void	BGLCPSTorus_recv_spinor (int dir, BGLQuad *data)
void	BGLCPSTorusPacketHeader_InitFill (void)
void	BGLCPSGrid_InitFill (void)
void	BGLCPSTorusMFifo_Init (void)
void	BGLCPSVarious_Init (void)
void	BGLCPSNet_Init (void)
void	saveCbufCntrlReg (void)
void	restoreCbufCntrlReg (void)
void	setCbufCntrlReg (int reg_no, unsigned int value)
void	printCbufCntrlReg (void)
void	glb_sum (Float *float_p)
	Sums a floating point number over all nodes in a 4-dimensinal grid.
void	glb_sum_gimp (Float *float_p)
void	glb_sum_five (Float *float_p)
	Sums a floating point number over all nodes in a 5-dimensinal grid.
void	glb_sum_dir (Float *float_p, int dir)
	Sums a floating point number over all nodes along a single direction.
void	glb_sum_multi_dir (const Float *float_p, const int dir, const int len)
	Sums a vector of floating point numbers over all nodes along a single direction.
void	glb_sum_multi_dir (LatData &dat, const int dir)
void	glb_sum_matrix_dir (Matrix *float_p, int dir)
	Sums a Matrix over all nodes along a single direction.
void	glb_max (Float *float_p)
	Finds the maximum floating point number over all nodes.
void	glb_min (Float *float_p)
	Finds the minimum floating point number over all nodes.
void	slice_sum (Float *float_p, int blcklength, int dir)
	Sums a vector of floating point numbers over all nodes in a hyperplane.
unsigned int	local_checksum (Float *float_p, int len)
unsigned int	global_checksum (Float *float_p, int len)
unsigned int	test_checksum (Float *float_p, int len)
void	glb_sum_internal (Float *float_p, int dir, int len)
void	glb_sum_internal2 (Float *float_p, int ndir)
void	glb_sum_internal2 (unsigned int *uint_p, int ndir, int sum_flag=1)
void	bsm (IFloat *, int, int, int, int, int)
void	getPlusData (IFloat *rcv_buf, IFloat *send_buf, int len, int mu)
	Sends data in negative direction/receives data from positive direction.
void	getMinusData (IFloat *rcv_buf, IFloat *send_buf, int len, int mu)
	Sends data in positive direction/receives data from negative direction.
void	getData (IFloat *rcv_buf, int rblklen, int rnumblk, int rstr, IFloat *send_buf, int sblklen, int snumblk, int sstr, int mu, int sign)
void	getPlusData (IFloat *rcv_buf, int rblklen, int rnumblk, int rstr, IFloat *send_buf, int sblklen, int snumblk, int sstr, int mu, int sign)
void	getMiunsData (IFloat *rcv_buf, int rblklen, int rnumblk, int rstr, IFloat *send_buf, int sblklen, int snumblk, int sstr, int mu, int sign)
void	getMinus2Data (IFloat *rcv_buf, IFloat *send_buf, int len, int mu, int nu)
	Sends data in positive direction/receives data from negative direction.
void	getMinus3Data (IFloat *rcv_buf, IFloat *send_buf, int len, int dir)
	Sends data in positive direction/receives data from negative direction.
int	TorusT ()
int	TorusX ()
	1 if the dir is a torus, 0 if it is not
int	TorusY ()
	1 if the dir is a torus, 0 if it is not
int	TorusZ ()
	1 if the dir is a torus, 0 if it is not
int	UniqueID ()
	Gets an ID which is unique for each node.
int	CoorT ()
	Gets the grid coordinate of this node in the T direction.
int	CoorX ()
	Gets the grid coordinate of this node in the X direction.
int	CoorY ()
	Gets the grid coordinate of this node in the Y direction.
int	CoorZ ()
	Gets the grid coordinate of this node in the Z direction.
int	CoorS ()
	Gets the grid coordinate of this node in the S direction.
int	CoorW ()
	Gets the grid coordinate of this node in the S direction.
int	SizeT ()
	Gets the size of the grid in the T direction.
int	SizeX ()
	Gets the size of the grid in the X direction.
int	SizeY ()
	Gets the size of the grid in the Y direction.
int	SizeZ ()
	Gets the size of the grid in the Z direction.
int	SizeS ()
	Gets the size of the grid in the S direction.
int	SizeW ()
	Gets the size of the grid in the S direction.
int	NumNodes ()
	Returns the total number of nodes in the processor grid.
unsigned int	Seed ()
	Gets a RNG seed.
unsigned int	SeedS ()
	Gets a RNG seed.
unsigned int	SeedT ()
	Gets a RNG seed.
unsigned int	SeedST ()
	Gets a RNG seed.
unsigned int	sync ()
	A barrier function.
int	SCURemap (SCUDir dir)
	Gets the direction used internally by the comms layer.
void	SCUTrans (SCUDirArg *arg)
	Generic single communication.
void	SCUTrans (SCUDirArg **arg, int n)
	Generic multiple communication.
void	SCUTrans (SCUDirArg *arg, unsigned int *offset, int n)
	Does a number of similar communications.
void	SCUSetDMA (SCUDirArg *arg)
	Initialise a data transfer.
void	SCUSetDMA (SCUDirArg **arg, int n)
	Initialise multiple data transfers.
void	SCUTransAddr (SCUDirArg *arg)
	Performs a previously set-up data transfer.
void	SCUTransAddr (SCUDirArg **arg, int n)
	Performs multiple previously set-up data transfers.
void	SCUTransComplete (void)
	A communications barrier function,.
void	p2vVector ()
void	p2vWilsonLib ()
void	p2vStagDs ()
void	p2vGhb ()
void	p2vCloverLib ()
void	m_multiply2r (Float *AB, Float *B)
void	m_multiply2l (Float *AB, Float *A)
void	m_multiply3 (Float *AB, Float *A, Float *B)
void	m_add (Float *AplusB, Float *A, Float *B)
void	m_equal (Float *A, Float *B)
void	m_identity (Float *A)
void	m_conjugate (Float *A)
void	m_invert (Float *matrix)
void	m_rand (Float *eps, Float squeeze)
Float	m_determinantR (Float *mtx)
Float	m_determinantI (Float *mtx)
Float	absR (Float x)
void	m_subtract (Float *AminusB, Float *A, Float *B)
void	m_zero (Float *x)
void	m_print (Float *A)
void *	amalloc (void *(*allocator)(size_t, const char *vname, const char *fname, const char *cname), size_t, int,...)
void	asqtad_dirac (IFloat *f_out, IFloat *f_in, int cb, int dag, int dir_flag=0)
void	asqtad_dirac_init (Fasqtad *lat)
void	asqtad_dirac_init_g (IFloat *frm_p)
void	asqtad_destroy_dirac_buf ()
void	asqtad_destroy_dirac_buf_g ()
void	clover_init (Clover *clover_p)
	Initialisation of parameters and memory used in the clover matrix multiplication.
void	clover_end (Clover *clover_p)
	Frees memory reserved by clover_init.
void	clover_mat_mlt (IFloat *Y, const IFloat *A, const IFloat *X, int n)
	Multiplication by the clover term.
void	clover_mat_mlt_asm (IFloat *, const IFloat *, const IFloat *, int n)
void	clover_mat_mlt_C (IFloat *, const IFloat *, const IFloat *, int n)
void	mat_inv (IFloat *out, const IFloat *in, int n, MAT_INV_ALG alg, IFloat *error_p)
void	mat_hrm_cmpr (IFloat *mat_out, const IFloat *mat_in, int mat_n)
void	mat_hrm_decm (IFloat *mat_out, const IFloat *mat_in, int mat_n)
void	mat_hrm_ldl (IFloat *L, IFloat *D, const IFloat *A, int n)
void	dwf_init (Dwf *dwf_p)
void	dwf_end (Dwf *dwf_p)
void	dwf_mdagm (Vector *out, Matrix *gauge_field, Vector *in, Float *dot_prd, Float mass, Dwf *dwf_lib_arg)
void	dwf_dslash (Vector *out, Matrix *gauge_field, Vector *in, Float mass, int cb, int dag, Dwf *dwf_lib_arg)
void	dwf_m (Vector *out, Matrix *gauge_field, Vector *in, Float mass, Dwf *dwf_lib_arg)
void	dwf_mdag (Vector *out, Matrix *gauge_field, Vector *in, Float mass, Dwf *dwf_lib_arg)
void	dwf_dslash_4 (Vector *out, Matrix *gauge_field, Vector *in, int cb, int dag, Dwf *dwf_lib_arg)
void	dwf_dslash_5_plus (Vector *out, Vector *in, Float mass, int dag, Dwf *dwf_lib_arg)
void	dwf_dslash_5_plus_slice (Vector *out, Vector *in, Float mass, int dag, Dwf *dwf_lib_arg, int s_slice)
void	dwf_dslash_5_plus_start (Vector *out, Vector *in, Float mass, int dag, Dwf *dwf_lib_arg)
void	dwf_dslash_all (Vector *out, Matrix *gauge_field, Vector *in, Float mass, int cb, int dag, Dwf *dwf_lib_arg)
int	NumChkb (RitzMatType ritz_mat)
void	Start ()
void	End ()
void	Start (int *argc, char ***argv)
void	_mcleanup (void)
void	__list_add (struct list_head *new_item, struct list_head *prev, struct list_head *next)
	Insert a new entry between two known consecutive entries.
void	list_add (struct list_head *new_item, struct list_head *head)
	Insert a new entry after the specified list item.
void	__list_del (struct list_head *prev, struct list_head *next)
	Delete a list entry.
void	list_del (struct list_head *entry)
	Delete a list entry after the specified list item.
int	list_empty (struct list_head *head)
	Inquire whether a list is minimal (single link).
void	list_splice (struct list_head *list, struct list_head *head)
	Insert one list into another.
void	p4_dirac (Vector *f_out, Vector *f_in, int cb, int dag)
void	p4_dirac_init (const void *gauge_field_addr)
void	p4_dirac_init_g ()
void	p4_destroy_dirac_buf ()
void	p4_destroy_dirac_buf_g ()
void	p4_dMdmu (Vector *f_out, Vector *f_in, int cb, int dag, int order)
void *	pmalloc (size_t request)
	Allocate memory.
void	pfree (void *p)
	Free allocate memory.
void	pclear (void)
	Doesn't appear to do anything.
void	pt_init (Lattice &lat)
	Initialization for parallel transporters.
void	pt_init_g ()
void	pt_delete ()
void	pt_delete_g ()
void	pt_mat (int n, Float **mout, Float **min, const int *dir)
void	pt_1vec (int n, Float **vout, Float **vin, int const *dir)
void	pt_2vec (int n, Float **vout, Float **vin, const int *dir)
int	pt_offset (int dir, int hop)
void	pt_vvpd (Float **vect, int n_vect, const int *dir, int n_dir, int hop, Float **sum)
void	pt_vvpd (Float **vect2, Float ***vect, int n_vect, const int *dir, int n_dir, int hop, Float **sum, int overwrite)
void	pt_shift_field (Float **v, const int *dir, int n_dir, int hop, Float **u)
void	pt_shift_field_vec (Float **v, const int *dir, int n_dir, int hop, Float **u)
void	pt_shift_link (Float **u, const int *dir, int n_dir)
void	pt_mat_cb (int n, Float **mout, Float **min, const int *dir, ChkbType cb)
	Parallel transport for checkerboarded Matrix fields.
void	pt_mat_cb (int n, Float **mout, Float **min, const int *dir, ChkbType cb, Float *new_gauge_field)
	Parallel transport for checkerboarded Matrix fields.
void	pt_mat_norm (int n, Float **mout, Float **min, const int *dir, ChkbType cb, Float *gauge)
void	pt_1vec_cb (int n, Float **vout, Float **vin, const int *dir, ChkbType cb)
	Parallel transport for checkerboarded Vector fields.
void	pt_1vec_cb (int n, Float **vout, Float **vin, const int *dir, ChkbType cb, Float *new_gauge_field)
	Parallel transport for checkerboarded Vector fields.
void	pt_1vec_cb (int n, Float *vout, Float **vin, const int *dir, ChkbType cb, int pad)
	Parallel transport for padded checkerboarded Vector fields.
void	pt_1vec_cb (int n, Float *vout, Float **vin, const int *dir, ChkbType cb, int pad, Float *new_gauge_field)
	Parallel transport for padded checkerboarded Vector fields.
void	pt_1vec_cb_norm (int n, Float **vout, Float **vin, const int *dir, ChkbType cb, Float *gauge)
void	pt_1vec_cb_pad (int n, Float *vout, Float **vin, const int *dir, ChkbType cb, int pad, Float *gauge)
void	qcdio_set_normalize (int)
	Routine to define whether the loaded data should be normalized.
void	qload_gauge (char *fprefix, Lattice &lat, int prec=GAUGE_CONF_PREC, int swap=SWAP_BYTE_ORDER, int transp=TRANSPOSE_THE_MATRICES)
	Routine for loading a gauge configuration.
void	qsave_gauge (char *fprefix, Lattice &lat, int prec=GAUGE_CONF_PREC, int swap=SWAP_BYTE_ORDER, int transp=TRANSPOSE_THE_MATRICES)
	Routine for saving the current gauge configuration.
FILE *	Fopen (FileIoType type, const char *filename, const char *mode)
	Opens a file.
int	Fclose (FileIoType type, FILE *stream)
	Closes a file.
size_t	Fwrite (const void *ptr, size_t size, size_t n, FILE *stream)
	Prints to a file.
size_t	Fread (void *ptr, size_t size, size_t n, FILE *stream)
int	Fprintf (FileIoType type, FILE *stream, const char *format,...)
	Read & Write from a file.
int	Vfprintf (FileIoType type, FILE *stream, const char *format, va_list ap)
	Prints a variable-length argument list to a file.
FILE *	Fopen (const char *filename, const char *mode)
	Opens a file.
int	Fclose (FILE *stream)
	Closes a file.
int	Fprintf (FILE *stream, const char *format,...)
	Prints to a file.
int	Vfprintf (FILE *stream, const char *format, va_list ap)
	Prints a variable-length argument list to a file.
void	qio_putGlobal (char *buf, size_t index, int count, void *arg)
void	qio_putGlobalSingle (char *buf, size_t index, int count, void *arg)
void	qio_getGlobal (char *buf, size_t index, int count, void *arg)
void	qio_getGlobalSingle (char *buf, size_t index, int count, void *arg)
CPS_QIO_UserRecordInfo *	CPS_QIO_create_user_record_info (char *plaq, char *linktr, char *info)
void	CPS_QIO_destroy_user_record_info (CPS_QIO_UserRecordInfo *record_info)
void	CPS_QIO_encode_user_record_info (QIO_String *record_string, CPS_QIO_UserRecordInfo *record_info)
int	CPS_QIO_decode_user_record_info (CPS_QIO_UserRecordInfo *record_info, QIO_String *record_string)
char *	CPS_QIO_get_plaq (CPS_QIO_UserRecordInfo *record_info)
char *	CPS_QIO_get_linktr (CPS_QIO_UserRecordInfo *record_info)
char *	CPS_QIO_get_info (CPS_QIO_UserRecordInfo *record_info)
int	CPS_QIO_defined_plaq (CPS_QIO_UserRecordInfo *record_info)
int	CPS_QIO_defined_linktr (CPS_QIO_UserRecordInfo *record_info)
int	CPS_QIO_defined_info (CPS_QIO_UserRecordInfo *record_info)
int	CPS_QIO_insert_userrecord_version (CPS_QIO_UserRecordInfo *record_info, char *version)
int	CPS_QIO_insert_userrecordinfo_plaq (CPS_QIO_UserRecordInfo *record_info, char *plaq)
int	CPS_QIO_insert_userrecordinfo_linktr (CPS_QIO_UserRecordInfo *record_info, char *linktr)
int	CPS_QIO_insert_userrecordinfo_info (CPS_QIO_UserRecordInfo *record_info, char *info)
int	CPS_QIO_insert_userrecord_tag_string (CPS_QIO_UserRecordInfoWrapper *wrapper, char *recordinfo_tags)
char *	CPS_QIO_get_user_record_info_tag_string (CPS_QIO_UserRecordInfoWrapper *wrapper)
CPS_QIO_PROP_FileRecordInfo *	CPS_QIO_PROP_create_file_record_info (char *type, char *info)
void	CPS_QIO_PROP_destroy_file_record_info (CPS_QIO_PROP_FileRecordInfo *record_info)
CPS_QIO_PROP_UserRecordInfo *	CPS_QIO_PROP_create_user_record_info (int spin, int color, char *info)
void	CPS_QIO_PROP_destroy_user_record_info (CPS_QIO_PROP_UserRecordInfo *record_info)
CPS_QIO_PROP_PAIRS_UserRecordInfo *	CPS_QIO_PROP_PAIRS_create_user_record_info (char *info)
void	CPS_QIO_PROP_PAIRS_destroy_user_record_info (CPS_QIO_PROP_PAIRS_UserRecordInfo *record_info)
CPS_QIO_SOURCE_UserRecordInfo *	CPS_QIO_SOURCE_create_user_record_info (char *info)
void	CPS_QIO_SOURCE_destroy_user_record_info (CPS_QIO_SOURCE_UserRecordInfo *record_info)
CPS_QIO_SOURCE_PAIRS_UserRecordInfo *	CPS_QIO_SOURCE_PAIRS_create_user_record_info (int spin, int color, char *info)
void	CPS_QIO_SOURCE_PAIRS_destroy_user_record_info (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info)
void	CPS_QIO_PROP_encode_file_record_info (QIO_String *record_string, CPS_QIO_PROP_FileRecordInfo *record_info)
void	CPS_QIO_PROP_encode_user_record_info (QIO_String *record_string, CPS_QIO_PROP_UserRecordInfo *record_info)
void	CPS_QIO_PROP_PAIRS_encode_user_record_info (QIO_String *record_string, CPS_QIO_PROP_PAIRS_UserRecordInfo *record_info)
void	CPS_QIO_SOURCE_encode_user_record_info (QIO_String *record_string, CPS_QIO_SOURCE_UserRecordInfo *record_info)
void	CPS_QIO_SOURCE_PAIRS_encode_user_record_info (QIO_String *record_string, CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info)
int	CPS_QIO_PROP_decode_file_record_info (CPS_QIO_PROP_FileRecordInfo *record_info, QIO_String *record_string)
int	CPS_QIO_PROP_decode_user_record_info (CPS_QIO_PROP_UserRecordInfo *record_info, QIO_String *record_string)
int	CPS_QIO_PROP_PAIRS_decode_user_record_info (CPS_QIO_PROP_PAIRS_UserRecordInfo *record_info, QIO_String *record_string)
int	CPS_QIO_SOURCE_decode_user_record_info (CPS_QIO_SOURCE_UserRecordInfo *record_info, QIO_String *record_string)
int	CPS_QIO_SOURCE_PAIRS_decode_user_record_info (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info, QIO_String *record_string)
char *	CPS_QIO_PROP_file_get_type (CPS_QIO_PROP_FileRecordInfo *record_info)
char *	CPS_QIO_PROP_file_get_info (CPS_QIO_PROP_FileRecordInfo *record_info)
int	CPS_QIO_PROP_user_get_spin (CPS_QIO_PROP_UserRecordInfo *record_info)
int	CPS_QIO_PROP_user_get_color (CPS_QIO_PROP_UserRecordInfo *record_info)
char *	CPS_QIO_PROP_user_get_info (CPS_QIO_PROP_UserRecordInfo *record_info)
char *	CPS_QIO_PROP_PAIRS_user_get_info (CPS_QIO_PROP_PAIRS_UserRecordInfo *record_info)
char *	CPS_QIO_SOURCE_user_get_info (CPS_QIO_SOURCE_UserRecordInfo *record_info)
int	CPS_QIO_SOURCE_PAIRS_user_get_spin (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info)
int	CPS_QIO_SOURCE_PAIRS_user_get_color (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info)
char *	CPS_QIO_SOURCE_PAIRS_user_get_info (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info)
int	CPS_QIO_PROP_file_defined_type (CPS_QIO_PROP_FileRecordInfo *record_info)
int	CPS_QIO_PROP_file_defined_info (CPS_QIO_PROP_FileRecordInfo *record_info)
int	CPS_QIO_PROP_user_defined_spin (CPS_QIO_PROP_UserRecordInfo *record_info)
int	CPS_QIO_PROP_user_defined_color (CPS_QIO_PROP_UserRecordInfo *record_info)
int	CPS_QIO_PROP_user_defined_info (CPS_QIO_PROP_UserRecordInfo *record_info)
int	CPS_QIO_PROP_PAIRS_user_defined_info (CPS_QIO_PROP_PAIRS_UserRecordInfo *record_info)
int	CPS_QIO_SOURCE_user_defined_info (CPS_QIO_SOURCE_UserRecordInfo *record_info)
int	CPS_QIO_SOURCE_PAIRS_user_defined_spin (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info)
int	CPS_QIO_SOURCE_PAIRS_user_defined_color (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info)
int	CPS_QIO_SOURCE_PAIRS_user_defined_info (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info)
int	CPS_QIO_PROP_insert_filerecord_version (CPS_QIO_PROP_FileRecordInfo *record_info, char *version)
int	CPS_QIO_PROP_insert_userrecord_version (CPS_QIO_PROP_UserRecordInfo *record_info, char *version)
int	CPS_QIO_PROP_PAIRS_insert_userrecord_version (CPS_QIO_PROP_PAIRS_UserRecordInfo *record_info, char *version)
int	CPS_QIO_SOURCE_insert_userrecord_version (CPS_QIO_SOURCE_UserRecordInfo *record_info, char *version)
int	CPS_QIO_SOURCE_PAIRS_insert_userrecord_version (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info, char *version)
int	CPS_QIO_PROP_insert_userrecordinfo_info (CPS_QIO_PROP_UserRecordInfo *record_info, char *info)
int	CPS_QIO_PROP_PAIRS_insert_userrecordinfo_info (CPS_QIO_PROP_PAIRS_UserRecordInfo *record_info, char *info)
int	CPS_QIO_SOURCE_insert_userrecordinfo_info (CPS_QIO_SOURCE_UserRecordInfo *record_info, char *info)
int	CPS_QIO_SOURCE_PAIRS_insert_userrecordinfo_info (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info, char *info)
int	CPS_QIO_PROP_insert_userrecordinfo_spin (CPS_QIO_PROP_UserRecordInfo *record_info, int spin)
int	CPS_QIO_PROP_insert_userrecordinfo_color (CPS_QIO_PROP_UserRecordInfo *record_info, int color)
int	CPS_QIO_SOURCE_PAIRS_insert_userrecordinfo_spin (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info, int spin)
int	CPS_QIO_SOURCE_PAIRS_insert_userrecordinfo_color (CPS_QIO_SOURCE_PAIRS_UserRecordInfo *record_info, int color)
int	CPS_QIO_PROP_insert_filerecordinfo_type (CPS_QIO_PROP_FileRecordInfo *record_info, char *type)
int	CPS_QIO_PROP_insert_filerecordinfo_info (CPS_QIO_PROP_FileRecordInfo *record_info, char *info)
int	CPS_QIO_PROP_insert_filerecord_tag_string (CPS_QIO_PROP_FileRecordInfoWrapper *wrapper, char *recordinfo_tags)
int	CPS_QIO_PROP_insert_userrecord_tag_string (CPS_QIO_PROP_UserRecordInfoWrapper *wrapper, char *recordinfo_tags)
int	CPS_QIO_PROP_PAIRS_insert_userrecord_tag_string (CPS_QIO_PROP_PAIRS_UserRecordInfoWrapper *wrapper, char *recordinfo_tags)
int	CPS_QIO_SOURCE_insert_userrecord_tag_string (CPS_QIO_SOURCE_UserRecordInfoWrapper *wrapper, char *recordinfo_tags)
int	CPS_QIO_SOURCE_PAIRS_insert_userrecord_tag_string (CPS_QIO_SOURCE_PAIRS_UserRecordInfoWrapper *wrapper, char *recordinfo_tags)
char *	CPS_QIO_PROP_get_file_record_info_tag_string (CPS_QIO_PROP_FileRecordInfoWrapper *wrapper)
char *	CPS_QIO_PROP_get_user_record_info_tag_string (CPS_QIO_PROP_UserRecordInfoWrapper *wrapper)
char *	CPS_QIO_PROP_PAIRS_get_user_record_info_tag_string (CPS_QIO_PROP_PAIRS_UserRecordInfoWrapper *wrapper)
char *	CPS_QIO_SOURCE_get_user_record_info_tag_string (CPS_QIO_SOURCE_UserRecordInfoWrapper *wrapper)
char *	CPS_QIO_SOURCE_PAIRS_get_user_record_info_tag_string (CPS_QIO_SOURCE_PAIRS_UserRecordInfoWrapper *wrapper)
rfloat	operator- (const rfloat &a)
rfloat	operator+ (const rfloat &a, const rfloat &b)
rfloat	operator+ (double a, const rfloat &b)
rfloat	operator+ (const rfloat &a, double b)
rfloat	operator- (const rfloat &a, const rfloat &b)
rfloat	operator- (double a, const rfloat &b)
rfloat	operator- (const rfloat &a, double b)
rfloat	operator * (const rfloat &a, const rfloat &b)
rfloat	operator * (double a, const rfloat &b)
rfloat	operator * (const rfloat &a, double b)
rfloat	operator/ (const rfloat &a, const rfloat &b)
rfloat	operator/ (double a, const rfloat &b)
rfloat	operator/ (const rfloat &a, double b)
void *	smalloc (size_t request, const char *vname, const char *fname="smalloc", const char *cname="")
	Allocate memory.
void *	smalloc (size_t request)
void *	smalloc (const char *cname, const char *fname, const char *vname, size_t request)
	Allocate memory.
void	sfree (void *p, const char *vname="", const char *fname="sfree", const char *cname="")
	Free allocate memory.
void	sfree (const char *cname, const char *fname, const char *vname, void *p)
	Free memory.
void	sclear ()
	Doesn't appear to do anything.
void *	fmalloc (size_t request, const char *vname, const char *fname="fmalloc", const char *cname="")
	Allocate memory.
void *	fmalloc (size_t request)
void	ffree (void *p, const char *vname="", const char *fname="ffree", const char *cname="")
	Free allocate memory.
void	ffree (const char *cname, const char *fname, const char *vname, void *p)
void *	fmalloc (const char *cname, const char *fname, const char *vname, size_t request)
	Allocate memory.
void	sprojTrXm (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with (1 - gamma_0).
void	sprojTrYm (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with (1 - gamma_1).
void	sprojTrZm (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with (1 - gamma_2).
void	sprojTrTm (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with (1 - gamma_3).
void	sprojTrXp (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with (1 + gamma_0).
void	sprojTrYp (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with (1 + gamma_1).
void	sprojTrZp (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with (1 + gamma_2).
void	sprojTrTp (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with (1 + gamma_3).
void	SigmaprojTrXY (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{0,1}.
void	SigmaprojTrYX (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{1,0}.
void	SigmaprojTrXZ (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{0,2}.
void	SigmaprojTrZX (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{2,0}.
void	SigmaprojTrXT (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{0,3}.
void	SigmaprojTrTX (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{3,0}.
void	SigmaprojTrYZ (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{1,2}.
void	SigmaprojTrZY (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{2,1}.
void	SigmaprojTrYT (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{1,3}.
void	SigmaprojTrTY (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{3,1}.
void	SigmaprojTrZT (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{2,3}.
void	SigmaprojTrTZ (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{3,2}.
void	SigmaprojTrXX (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{0,0}.
void	SigmaprojTrYY (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{1,1}.
void	SigmaprojTrZZ (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{2,2}.
void	SigmaprojTrTT (IFloat *f, IFloat *v_plus_mu, IFloat *w, int num_blk, int v_plus_mu_stride, int w_stride)
	Projection with Sigma_{3,3}.
void	stag_dirac (IFloat *f_out, IFloat *f_in, int cb, int dag, int dir_flag=0)
void	stag_dirac_init (const void *gauge_field_addr)
void	stag_dirac_init_g ()
void	stag_destroy_dirac_buf ()
void	stag_destroy_dirac_buf_g ()
void	staggered_local_pion (Lattice &lat, Float mass, IFloat *pion_corr, int time_size)
	Simple pseudoscalar correlator.
void	compare_array_relative (Float *pion_corr_A, Float *pion_corr_B, Float tol, int time_size)
	Comparison of two arrays.
void	compare_float_relative (Float pion_corr_A, Float pion_corr_B, Float tol)
	Comparison of two floating-point numbers.
Float	dclock (void)
	Gets the wall-clock time.
Float	print_time (const char *cname, const char *fname, Float time)
Float	print_flops (unsigned long long nflops, Float time)
	Prints the FLOPS rate to stdout.
Float	print_flops (char *cname, char *fname, unsigned long long nflops, Float time)
	Prints the FLOPS rate to stdout.
Float	print_flops (unsigned long long nflops, struct timeval *start, struct timeval *end)
	Prints the FLOPS rate to stdout.
Float	print_flops (char *cname, char *fname, unsigned long long nflops, struct timeval *start, struct timeval *end)
	Prints the FLOPS rate to stdout.
void	moveMem (void *b, const void *a, int len)
	vector copy; b = a
void	moveFloat (Float *b, const Float *a, int len)
void	mDotMEqual (IFloat *c, const IFloat *a, const IFloat *b)
	3x3 complex matrix multiplication; c = ab
void	mDotMPlus (IFloat *c, const IFloat *a, const IFloat *b)
	3x3 complex matrix multiplication and sum; c += ab
void	uDotXEqual (IFloat *y, const IFloat *m, const IFloat *x)
	3x3 complex matrix times vector; y = Mx
IFloat	dotProduct (const IFloat *a, const IFloat *b, int)
	vector scalar product; a.b
void	vecAddEquVec (IFloat *a, const IFloat *b, int)
	vector addition; a += b
void	vecMinusEquVec (IFloat *a, const IFloat *b, int)
	vector subtraction; a -= b
void	vecNegative (IFloat *a, const IFloat *b, int)
	vector negation; a = -b
void	vecZero (IFloat *a, int size)
	set all elements to zero
void	vecTimesEquFloat (IFloat *a, IFloat b, int)
	real scalar times vector multiplication; a *= b
void	vecEqualsVecTimesEquFloat (IFloat *a, IFloat *b, IFloat c, int)
	real scalar times vector multiplication; a = c*b
void	fTimesV1PlusV2 (IFloat *a, IFloat b, const IFloat *c, const IFloat *d, int size)
	vector linear combination; a = bc+d
void	fTimesV1MinusV2 (IFloat *a, IFloat b, const IFloat *c, const IFloat *d, int size)
	vector linear combination; a = bc-d
void	compDotProduct (IFloat *c_r, IFloat *c_i, const IFloat *a, const IFloat *b, int)
	complex vector scalar product; a.b
void	cTimesV1PlusV2 (IFloat *a, IFloat b_re, IFloat b_im, const IFloat *c, const IFloat *d, int size)
	complex vector linear combination; a = bc+d
void	cTimesV1MinusV2 (IFloat *a, IFloat b_re, IFloat b_im, const IFloat *c, const IFloat *d, int size)
	Not implemented on qcdsp.
void	oneMinusfTimesMatrix (IFloat *a, IFloat b, const IFloat *c, int n)
	matrix linear combination; a = 1-bc
void	uDotXPlus (IFloat *y, const IFloat *u, const IFloat *x)
	Multiplication of complex vector by matrix and addition; y += Mx.
void	uDotXMinus (IFloat *y, const IFloat *u, const IFloat *x)
	Multiplication of complex vector by matrix and subtraction; y -= Mx.
void	uDagDotXEqual (IFloat *y, const IFloat *u, const IFloat *x)
	Multiplication of complex vector by hermitian conjugate matrix and summation; y += M^dagger x.
void	uDagDotXPlus (IFloat *y, const IFloat *u, const IFloat *x)
	Multiplication of complex vector by hermitian conjugate matrix; y = M^dagger x.
IFloat	reChar6 (IFloat *p)
IFloat	imChar6 (IFloat *p)
IFloat	reChar8 (IFloat *p)
IFloat	reChar10 (IFloat *p)
IFloat	imChar10 (IFloat *p)
void	xaxpy (Float *scalep, Float *InOutScale, Float *Add, int len)
void	xaxpy_norm (Float *scalep, Float *InOutScale, Float *Add, int len, Float *res)
void	vaxpy3 (Vector *res, Float *scale, Vector *mult, Vector *add, int ncvec)
void	vaxpy3_m (Matrix *res, Float *scale, Matrix *mult, const Matrix *add, int ncvec)
void	vaxpy3_norm (Vector *res, Float *scale, Vector *mult, Vector *add, int ncvec, Float *norm)
void	vaxpy3_norm_m (Vector *res, Float *scale, Vector *mult, Vector *add, int ncvec, Float *norm)
void	m1m2 (Matrix *res, const Matrix *m1, const Matrix *m2, int *length)
void	m1m2dag (Matrix *res, const Matrix *m1, const Matrix *m2, int *length)
void	m1dagm2dag (Matrix *res, const Matrix *m1, const Matrix *m2, int *length)
void	gdagmdag (Matrix *res, const Matrix *g, const Matrix *m, int *length)
void	fm1m2pm3 (Matrix *res, Float *scale, const Matrix *m1, const Matrix *m2, Matrix *m3, int *length)
void	fm1m2dagpm3 (Matrix *res, Float *scale, const Matrix *m1, const Matrix *m2, Matrix *m3, int *length)
void	fm1dagm2dagpm3 (Matrix *res, Float *scale, const Matrix *m1, const Matrix *m2, Matrix *m3, int *length)
void	fgdagm1dagpm2 (Matrix *res, Float *scale, const Matrix *g, const Matrix *m1, Matrix *m2, int *length)
char *	vml_enum_string (enum_t *val, struct vml_enum_map *)
enum_t *	vml_enum_val (char *string, struct vml_enum_map *)
bool_t	vml_void (void)
bool_t	vml_short (VML *__vmls, char *name, short *__sp)
bool_t	vml_u_short (VML *__vmls, char *name, u_short *__usp)
bool_t	vml_int (VML *__vmls, char *name, int *__ip)
bool_t	vml_u_int (VML *__vmls, char *name, u_int *__up)
bool_t	vml_long (VML *__vmls, char *name, long *__lp)
bool_t	vml_u_long (VML *__vmls, char *name, u_long *__ulp)
bool_t	vml_hyper (VML *__vmls, char *name, quad_t *__llp)
bool_t	vml_u_hyper (VML *__vmls, char *name, u_quad_t *__ullp)
bool_t	vml_longlong_t (VML *__vmls, char *name, quad_t *__llp)
bool_t	vml_u_longlong_t (VML *__vmls, char *name, u_quad_t *__ullp)
bool_t	vml_int8_t (VML *__vmls, char *name, int8_t *__ip)
bool_t	vml_uint8_t (VML *__vmls, char *name, uint8_t *__up)
bool_t	vml_int16_t (VML *__vmls, char *name, int16_t *__ip)
bool_t	vml_uint16_t (VML *__vmls, char *name, uint16_t *__up)
bool_t	vml_int32_t (VML *__vmls, char *name, int32_t *__ip)
bool_t	vml_uint32_t (VML *__vmls, char *name, uint32_t *__up)
bool_t	vml_int64_t (VML *__vmls, char *name, int64_t *__ip)
bool_t	vml_uint64_t (VML *__vmls, char *name, uint64_t *__up)
bool_t	vml_bool (VML *__vmls, char *name, bool_t *__bp)
bool_t	vml_enum (VML *__vmls, char *name, enum_t *__ep, struct vml_enum_map *list)
bool_t	vml_array (VML *_vmls, char *name, caddr_t *__addrp, u_int *__sizep, u_int __maxsize, u_int __elsize, vmlproc_t __elproc)
bool_t	vml_bytes (VML *__vmls, char *name, char **__cpp, u_int *__sizep, u_int __maxsize)
bool_t	vml_opaque (VML *__vmls, char *name, caddr_t __cp, u_int __cnt)
bool_t	vml_string (VML *__vmls, char *name, char **__cpp, u_int __maxsize)
bool_t	vml_union (VML *__vmls, char *name, enum_t *__dscmp, char *__unp, const struct vml_discrim *__choices, vmlproc_t dfault)
bool_t	vml_char (VML *__vmls, char *name, char *__cp)
bool_t	vml_u_char (VML *__vmls, char *name, u_char *__cp)
bool_t	vml_vector (VML *__vmls, char *name, char *__basep, u_int __nelem, u_int __elemsize, vmlproc_t __vml_elem)
bool_t	vml_float (VML *__vmls, char *name, float *__fp)
bool_t	vml_double (VML *__vmls, char *name, double *__dp)
bool_t	vml_reference (VML *__vmls, char *name, caddr_t *__xpp, u_int __size, vmlproc_t __proc)
bool_t	vml_pointer (VML *__vmls, char *name, char **__objpp, u_int __obj_size, vmlproc_t __vml_obj)
bool_t	vml_wrapstring (VML *__vmls, char *name, char **__cpp)
u_long	vml_sizeof (vmlproc_t, void *)
bool_t	vml_netobj (VML *__vmls, char *name, struct netobj *__np)
bool_t	vmlmem_create (VML *__vmls, char *__addr, int __size, enum vml_op __xop)
bool_t	vmlstdio_create (VML *__vmls, FILE *fp, enum vml_op __xop)
bool_t	vmlfd_create (VML *__vmls, int fd, enum vml_op __xop)
bool_t	vmlfile_create (VML *__vmls, char *file, enum vml_op __xop)
void	vml_destroy (VML *__vmls)
void	vml_markup_type (enum vml_markup type)
void	vmlrec_create (VML *__vmls, u_int __sendsize, u_int __recvsize, caddr_t __tcp_handle, int(*__readit)(char *, char *, int), int(*__writeit)(char *, char *, int))
bool_t	vmlrec_endofrecord (VML *__vmls, bool_t __sendnow)
bool_t	vmlrec_skiprecord (VML *__vmls)
bool_t	vmlrec_eof (VML *__vmls)
void	vml_free (vmlproc_t __proc, char *name, char *__objp)
void	vml_struct_begin (VML *vmls, char *type, char *instance)
void	vml_struct_end (VML *vmls, char *type, char *instance)
void	vml_class_begin (VML *vmls, char *type, char *instance)
void	vml_class_end (VML *vmls, char *type, char *instance)
void	wfm_init (struct WilsonArg *)
void	wfm_end (struct WilsonArg *)
void	wfm_vec_init (WilsonArg *wilson_p)
void	wfm_vec_end (struct WilsonArg *)
void	wilson_compat_init (Wilson *wilson_p, WilsonArg *wil)
void	wilson_compat_end (Wilson *wilson_p)
void	wfm_mdagm (Float *chi, Float *u, Float *psi, Float *mp_sq_p, Float Kappa)
void	wfm_dslash (Float *chi, Float *u, Float *psi, int cb, int dag)
void	wfm_m (Float *chi, Float *u, Float *psi, Float kappa)
void	wfm_mdag (Float *chi, Float *u, Float *psi, Float kappa)
void	wfm_dslash_two (Float *chi0, Float *chi1, Float *u, Float *psi0, Float *psi1, int cb0, int cb1, int dag)
void	wfm_dslash_vec (int nvec, Float *chis[], Float *u, Float *psis[], int cbs[], int dag)
void	wfm_dslash_begin (Float *chi0, Float *u, Float *psi0, int cb0, int dag)
void	wfm_dslash_end (Float *chi0, Float *u, Float *psi0, int cb0, int dag)
void	wilson_init (Wilson *wilson_p)
	Initialisation of parameters and memory used in the Wilson matrix multiplication.
void	wilson_end (Wilson *wilson_p)
	Frees memory reserved by wilson_init.
void	wilson_mdagm (IFloat *chi, IFloat *u, IFloat *psi, IFloat *mp_sq_p, IFloat Kappa, Wilson *wilson_p)
	Multiplication by the odd-even preconditioned Wilson matrix.
void	wilson_dslash (IFloat *chi, IFloat *u, IFloat *psi, int cb, int dag, Wilson *wilson_p)
	Multiplication by the Wilson matrix hopping term.
void	wilson_dslash_two (Float *chi0, Float *chi1, Float *u, Float *psi0, Float *psi1, int cb0, int cb1, int dag, Wilson *wp)
void	wilson_m (IFloat *chi, IFloat *u, IFloat *psi, IFloat kappa, Wilson *wilson_p)
	Multiplication by the odd-even preconditioned Wilson matrix.
void	wilson_mdag (IFloat *chi, IFloat *u, IFloat *psi, IFloat kappa, Wilson *wilson_p)
	Multiplication by the odd-even preconditioned Wilson matrix.
void	wilson_set_sloppy (bool sloppy)
void	gamma_5 (Float *v_out, Float *v_in, int num_sites)
void	cmhb_kernel (Float *, Float *)
void	metropolis_kernel (Float *, Float *)
Matrix	operator * (const Matrix &m1, const Matrix &m2)
void	p (Matrix x)
void	cTimesVec (IFloat *a, IFloat re, IFloat im, const IFloat *c, int len)
void	twist_links (Lattice &lat, const Float Q, const int mu)
int	siteOffset (const int lcl[], const int lcl_sites[])
int	isOffNode (int *s)
int	max (int a, int b)
int	min (int a, int b)
void	getNodeOriginEnd ()
void	sub (Matrix &x, Matrix &y, int ind)
void	ZeroReal (Matrix &m)
Complex	MkTop (Matrix plaqs1[], Matrix plaqs2[])
void	CloverLeaf (Lattice &lattice, Matrix &pl, int *pos, int mu, int nu)
void	CloverLeafRect (Lattice &lattice, Matrix &pl, int *pos, int mu, int nu)
void	CloverLeaf1x3 (Lattice &lattice, Matrix &pl, int *pos, int mu, int nu)
void	CloverLeaf2x2 (Lattice &lattice, Matrix &pl, int *pos, int mu, int nu)
void	CloverLeaf3x3 (Lattice &lattice, Matrix &pl, int *pos, int mu, int nu)
const int	nfunc (5)
void	glb_sum_multi_dir (Float *float_p, int dir, int len)
void	get1Data (IFloat *rcv_buf, IFloat *send_buf, int len, int mu, int plus)
void *	smalloc (int request)
	Allocate memory.
void	sfree (void *p)
	Free allocate memory.
IFloat	abs (IFloat x)
void	dirac_sum2_acc_cpp (int s, long chi, long tmpfrm, long b)
void	dirac_cmv_cpp (int sites, long chi, long u, long a, long tmpfrm)
void	dirac_cmv_jcw_agg_cpp (int sites, long chi, long u, long a, long tmpfrm)
void	dirac_sum2_cpp (int s, long chi, long tmpfrm, long b)
void	copy_buffer_cpp (int n, long src, long dest, long ptable)
void	copy_buffer (int n, long src, long dest, long ptable)
void	TransfP (int off_node, int nflush_g, IFloat *v, IFloat *mtmp, int n)
void	TransfM (int off_node, int nflush_g, IFloat *v, IFloat *mtmp, int n)
void	DaggerM (IFloat *w_t1, IFloat *v)
void	Parallel (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int dir_1, int dir_2, IFloat *v, IFloat *u, int multi_flag, int tranfs_flag)
void	Staple3_PP (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, IFloat *v, IFloat *u, int nflush_g, int sum_flag)
void	Staple3_PN (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, IFloat *v, IFloat *u, int nflush_g, int sum_flag)
void	Staple3_NP (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, IFloat *v, IFloat *u, int nflush_g, int sum_flag)
void	Staple3_NN (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, IFloat *v, IFloat *u, int nflush_g, int sum_flag)
void	Staple5_PP (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, int ro, IFloat *v, IFloat *u, int nflush_g)
void	Staple5_PN (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, int ro, IFloat *v, IFloat *u, int nflush_g)
void	Staple5_NP (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, int ro, IFloat *v, IFloat *u, int nflush_g)
void	Staple5_NN (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, int ro, IFloat *v, IFloat *u, int nflush_g)
void	Staple7_PP (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, int ro, int de, IFloat *v, IFloat *u, int nflush_g)
void	Staple7_PN (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, int ro, int de, IFloat *v, IFloat *u, int nflush_g)
void	Staple7_NP (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, int ro, int de, IFloat *v, IFloat *u, int nflush_g)
void	Staple7_NN (IFloat *InMatrix, IFloat *OutMatrix, int *coord, int n, int nu, int ro, int de, IFloat *v, IFloat *u, int nflush_g)
void	asqtad_dirac_init_g ()
void	dirac_comm_assert ()
void	asqtad_dirac (IFloat *b, IFloat *a, int a_odd, int add_flag)
void	dirac_cmv_nl_mod_cpp (int sites, long chi, long u, long a, long tmpfrm)
void	dirac_cmv_mod_cpp (int sites, long chi, long u, long a, long tmpfrm)
void	dirac_cmv_nl (int sites, long chi, long u, long a, long tmpfrm)
void	dirac_sum_acc_cpp (int s, long chi, long tmpfrm, long b)
void	dirac_sum2_64_cpp (int s, long chi, long tmpfrm, long b)
void	dirac_sum_cpp (int s, long chi, long tmpfrm, long b)
void	vaxmy (Float *scale, Vector *mult, Vector *sub, int ncvec)
void	vaxmy_vxdot (Float *scale, Vector *mult, Vector *sub, int ncvec, Float *norm)
void	vaxpy (Float *scale, Vector *mult, Vector *add, int ncvec)
void	vaxpy_norm (Float *scale, Vector *mult, Vector *add, int ncvec, Float *norm)
void	vaxpy_vxdot (Float *scale, Vector *mult, Vector *add, int ncvec, Float *norm)
void	report_flops (int flops, struct timeval *start, struct timeval *end)
void	invcg_r_norm (IFloat *resa, IFloat *scale, IFloat *mult, IFloat *add, int ncvec, IFloat *norm)
void	invcg_xp_update (IFloat *out1, IFloat *out2, IFloat *A, IFloat *B, IFloat *mult, IFloat *add, int size)
void	FtV1pV2Skip (double *, double, const double *, const double *, int)
void	FtV1pV2Skip_asm (double *out, const double *scale, const double *V1, const double *V2, int ntwo_spin)
void	set_pt (Fp4 *lat)
void	p4_recom (int sites, Float *src, Float **res)
void	p4_recom_n (int sites, Float *src, Float **res)
void	p4_dsum (int sites, Float *src, Float *f_out, double *one, double *negone)
int	u_offset (const int *x)
int	x_offset (const int *x)
void	dirac_cmv_l (int sites, long chi, long u, long a, long tmpfrm)
void	save_reg (long intbuf, long dbuf)
void	restore_reg (long intbuf, long dbuf)
void	dirac_cmv (int sites, long chi, long u, long a, long tmpfrm)
void	dirac_sum_acc (int sites, long chi, long tmpfrm, long b)
void	dirac_sum (int sites, long chi, long tmpfrm, long b)
void	flush_cache_spinor (int nflush, long flush_buffer)
void	flush_cache (int nflush, long flush_buffer)
void	stag_dirac (IFloat *b, IFloat *a, int a_odd, int add_flag)
void	wilson_compat_init (Wilson *wilson_p)
void	wilson_compat_init (CPS_NAMESPACE::Wilson *wilson_p, WilsonArg *wil)
void	wilson_compat_end (CPS_NAMESPACE::Wilson *wilson_p)
void	wilson_dslash (Float *chi, Float *u, Float *psi, int cb, int dag, Wilson *wp)
void	wilson_dslash_spproj (double *out0, double *out1, double *out2, double *out3, double *inf)
void	wilson_dslash_cmat_spproj (double *out0, double *out1, double *out2, double *out3, double *u, double *inf)
void	wfm_cmat_two_spproj (IFloat *af0, IFloat *af1, IFloat *af2, IFloat *af3, IFloat *ab0, IFloat *ab1, IFloat *ab2, IFloat *ab3, IFloat *u, IFloat *psi, IFloat sign, Wilson *wilson_p, int cb)
void	wilson_dslash_csmat (double *out, double *u, double *in, double *inp, int mu)
void	wilson_dslash_csmatdag (double *out, double *u, double *in, int mu)
void	wilson_dslash_trick (double *outf, double *in0, double *in1, double *in2, double *in3, double sign, int accum)
void	wilson_dslash_mat_trick (double *outf, double *u, double *wfm_tmp0, double *wfm_tmp1, double *wfm_tmp2, double *wfm_tmp3, double *in0, double *in1, double *in2, double *in3, double *in0p)
double wfm_tmp0[HALF_SPINOR_SIZE]	__attribute__ ((aligned(BGL_L1_ALIGNSIZE)))
void	wfm_mat_trick (IFloat *chi, IFloat *u, IFloat *af0, IFloat *af1, IFloat *af2, IFloat *af3, IFloat sign, Wilson *wilson_p, int cb)
void	wfm_sublatt_pointers (int lx, int ly, int lz, int lt, int slatt, Wilson *wilson_p)
void	wfm_trick (IFloat *chi, IFloat *ab0, IFloat *ab1, IFloat *ab2, IFloat *ab3, IFloat sign, Wilson *wilson_p, int cb)
void	wfm_comm ()
double wfm_reg[64]	__attribute__ ((aligned(BGL_QUAD_ALIGNSIZE)))
void	wilson_dslash_csmatdag (Float *out, Float *u, Float *in, int mu)
void	wilson_dslash_spproj (double *out0, double *out1, double *out2, double *out3, double *inf, double sign)
void	wfm_cmat_spproj (IFloat *ab0, IFloat *ab1, IFloat *ab2, IFloat *ab3, IFloat *u, IFloat *psi, IFloat sign, Wilson *wilson_p, int cb)
void	wfm_comm_backward (IFloat *af0, IFloat *af1, IFloat *af2, IFloat *af3, Wilson *wilson_p)
void	wfm_comm_forward (IFloat *ab0, IFloat *ab1, IFloat *ab2, IFloat *ab3, Wilson *wilson_p)
void	wilson_dslash_csmat (double *out, double *u, double *in, int mu)
void	wilson_dslash_csmat (Float *out, Float *u, Float *in, int mu)
void	wfm_spproj (IFloat *af0, IFloat *af1, IFloat *af2, IFloat *af3, IFloat *psi, IFloat sign, Wilson *wilson_p, int cb)
void	wfm_scope_check (int i)
void	wfm_scope_assert (int i)
void	wfm_init_internal (int num, WilsonArg *wilson_p)
void	wfm_end_internal (int num)
void	wfm_init (WilsonArg *wilson_p)
void	rec_su3t (void *psi, void *gauge, void *chiin, void *len, unsigned *tims)
void	MatHermElements (DiracOpWilsonTypes *dirac_op, Vector **psi, int n_vec, int f_size, Float *diag, Complex *off_diag)
void	PrintDot (char *fname, char *vname, Vector *tmp, int f_size)
Float	Norm (Vector *psi, int f_size)
Float	GramSchmNorm (Vector *psi, Vector *vec, int f_size)
void	cTimesC (IFloat *a, IFloat re, IFloat im)
void	g5theta (Vector *in, int vol, IFloat ctheta, IFloat stheta)
void	Start (const BGLAxisMap *axis_map)
void	negate_link (unsigned link_size, IFloat *link)
	Negate a floating point array.
void	site2cram (IFloat *src, IFloat *dst, unsigned site_size)
	Copy an array.
void	site2dram (IFloat *src, IFloat *dst, unsigned *link_tbl, unsigned site_size)
	Copy and rearrange an array.
void	MultStagPhases (CAP cap)
void	RunGConverter (CAP cap, unsigned *site_tbl, unsigned *link_tbl)
void	CanonToAnything (CAP cap, StrOrdType new_str_ord)
void	FcanonToWilson (CAP cap, int number_of_checkerboards=2)
void	FwilsonToCanon (CAP cap, int number_of_checkerboards=2)
void	FcanonToStag (CAP cap, int number_of_checkerboards=2)
void	FstagToCanon (CAP cap, int number_of_checkerboards=2)
void	site2cram (void *src, void *dst, unsigned site_size)
void	site2dram (void *src, void *dst, unsigned *link_tbl, unsigned site_size)
void	gamma_5 (IFloat *v_out, IFloat *v_in, int num_sites)
	for (blk=0;blk< num_blk;blk++)
void	print_list (list_head *lp)
	Prints the addresses of the items in a linked list.
int	list_len (list_head *l)
	The number of items in a linked list.
void	pt_mat (int N, IFloat **fout, IFloat **fin, const int *dir)
void	pt_1vec (int N, IFloat **fout, IFloat **fin, const int *dir)
void	pt_vvpd (IFloat **vect2_v, IFloat ***vect_v, int n_vect, const int *dir, int n_dir, int hop, IFloat **sum_m, int overwrite)
void	pt_vvpd (IFloat **vect_v, int n_vect, const int *dir, int n_dir, int hop, IFloat **sum_m)
void	pt_shift_field_vec (IFloat **v_v, const int *dir, int n_dir, int hop, IFloat **u_v)
void	pt_shift_field (IFloat **v_m, const int *dir, int n_dir, int hop, IFloat **u_m)
	u[x] = v[x+dir] for n_dir forward or backward directions dir.
void	pt_shift_link (IFloat **u_m, const int *dir, int n_dir)
	u[-/+nu](x) = U_[-/+nu](x)
void	pt_mat_cb (int n, IFloat **mout, IFloat **min, const int *dir, ChkbType cb)
void	pt_mat_cb (int n, IFloat **mout, IFloat **min, const int *dir, ChkbType cb, IFloat *new_gauge_field)
void	pt_mat_norm (int n, IFloat **mout, IFloat **min, const int *dir, ChkbType cb, IFloat *gauge)
void	pt_1vec_cb (int n, IFloat **vout, IFloat **vin, const int *dir, ChkbType cb)
void	pt_1vec_cb (int n, IFloat **vout, IFloat **vin, const int *dir, ChkbType cb, IFloat *new_gauge_field)
void	pt_1vec_cb (int n, IFloat *vout, IFloat **vin, const int *dir, ChkbType cb, int pad)
void	pt_1vec_cb (int n, IFloat *vout, IFloat **vin, const int *dir, ChkbType cb, int pad, IFloat *new_gauge_field)
void	pt_1vec_cb_norm (int n, IFloat **fout, IFloat **fin, const int *dir, ChkbType cb, IFloat *gauge)
void	pt_1vec_cb_pad (int n, IFloat *fout, IFloat **fin, const int *dir, ChkbType cb, int pad, IFloat *gauge)
string	elmSpacePar (string str)
void	qloadsave_pump_data (int *pos, unsigned char *buf, int byte_size, int inout)
	A utility routine used by qloadsave_gauge.
void	block_swap_double (double *buffer, int length)
	Routine for performing the bytes-swapping of double precision raw data files.
void	block_swap (int *buffer, int length)
	Routine for performing the bytes-swapping of single precision raw data files.
void	qcdio_norm_row (Complex *data_, int row)
	Normalises the specified row of an SU3 complex matrix:.
void	qcdio_orthog_rows (Complex *data_, int row1, int row2)
	Orthogonalises two rows within an SU3 matrix:.
void	qcdio_cross_rows (Complex *data_, int row1, int row2, int row3)
	Computes the cross-product of the 1st and 2nd rows in an SU3 matrix.
void	qload_unpackstrip (unsigned char *mtxfilebuff, int filebufsize, Matrix *siteaddr, int prec, int swap, int transp)
	A utility routine used by qloadsave_gauge.
void	qsave_packstrip (unsigned char *mtxfilebuff, int filebufsize, Matrix *siteaddr, int prec, int swap, int transp)
	A utility routine used by qloadsave_gauge.
void	qload_parameters (char *fprefix, Lattice &lat)
	A utility routine used by qloadsave_gauge.
void	qsave_parameters (char *fprefix, Lattice &lat)
	A utility routine used by qloadsave_gauge.
void	qloadsave_gauge (int mode, char *fprefix, Lattice &lat, int prec, int swap, int transp)
	A utility routine used by qload_gauge and qsave_gauge..
void	sum_uint (void *inout, void *in)
Rcomplex	conj (const Rcomplex &c)
Rcomplex	operator- (const Rcomplex &c)
int	diagonalize (Float a[][2 *COLORS], Float d[], Float v[][2 *COLORS])
void	normalize (Float *p)
	Utility routine used by Matrix::Unitarize.
void	orthogonalize (Float *p2, const Float *p1)
	Utility routine used by Matrix::Unitarize.
void	crossProductConj (Float *v3, const Float *v1, const Float *v2)
	Utility routine used by Matrix::Unitarize.
void	moveVec (Float *b, const Float *a, int len)
void	vecEqualsVecTimesEquFloat (IFloat *a, IFloat *b, Float c, int len)
Variables
const Float	le = log(exp(1.))
const int	MAX_STRING_LEN = 20
vml_enum_map	DENS_LIM_map []
vml_enum_map	DirType_map []
vml_enum_map	FclassType_map []
vml_enum_map	GclassType_map []
vml_enum_map	StrOrdType_map []
vml_enum_map	CnvFrmType_map []
vml_enum_map	FermionFieldDimension_map []
vml_enum_map	PreserveType_map []
vml_enum_map	StartConfType_map []
vml_enum_map	StartSeedType_map []
vml_enum_map	ChkbType_map []
vml_enum_map	DagType_map []
vml_enum_map	BndCndType_map []
vml_enum_map	FixGaugeType_map []
vml_enum_map	SprojType_map []
vml_enum_map	SigmaprojType_map []
vml_enum_map	RitzMatType_map []
vml_enum_map	RatApproxType_map []
vml_enum_map	MultiShiftSolveType_map []
vml_enum_map	MassRenormaliseDir_map []
vml_enum_map	FieldType_map []
vml_enum_map	RatType_map []
vml_enum_map	WbaryonFold_map []
vml_enum_map	SourceKind_map []
vml_enum_map	SinkKind_map []
vml_enum_map	MomentumKind_map []
vml_enum_map	DEVOperatorKind_map []
vml_enum_map	WMesonOpKind_map []
vml_enum_map	WMesonState_map []
vml_enum_map	WMesonOutputName_map []
vml_enum_map	WMesonCategory_map []
vml_enum_map	WExtMesonBEOutputName_map []
vml_enum_map	WExtMesonBEState_map []
vml_enum_map	WExtMesonBEOp_map []
vml_enum_map	WExtMesonBECategory_map []
vml_enum_map	FieldTensorId_map []
vml_enum_map	PatternType_map []
vml_enum_map	IntegratorType_map []
vml_enum_map	IntegratorLevel_map []
vml_enum_map	ReunitarizeType_map []
vml_enum_map	ReproduceTest_map []
vml_enum_map	TestReproduceTest_map []
vml_enum_map	ReverseTest_map []
vml_enum_map	MetropolisType_map []
vml_enum_map	ForceMeasure_map []
vml_enum_map	EigenMeasure_map []
vml_enum_map	RhmcPolesAction_map []
vml_enum_map	HmdLimits_map []
vml_enum_map	InverterType_map []
vml_enum_map	RationalApproxType_map []
vml_enum_map	RationalBoundsType_map []
vml_enum_map	StaticBActionLinkSmearType_map []
vml_enum_map	GaussianKernelLinkSmearType_map []
vml_enum_map	MeasLimits_map []
vml_enum_map	MeasType_map []
vml_enum_map	MeasIOTask_map []
vml_enum_map	NoiseType_map []
vml_enum_map	PBP_LIM_map []
vml_enum_map	SourceType_map []
vml_enum_map	RandomType_map []
vml_enum_map	StagQuarkSrcType_map []
vml_enum_map	StagQuarkLocalType_map []
vml_enum_map	StagQuarkDir_map []
IFloat	WGamma [16][4][4][2]
vml_enum_map	MesonLimits_map []
const int	MAX_BUF = 72
CheckSum	CSM
GlobalDataShift	GDS
int	dwfso_wire_map []
Error	ERR
const double	FPConv_PI = 3.14159265358979323846264338327950288419716939937510
const char	FPConv_ieee32pi_big [4] = { '\x40', '\x49', '\x0f', '\xdb' }
const char	FPConv_ieee64pi_big [8]
int	gjp_local_axis [] = {0, 0, 0, 0, 1, 1}
SCUDir	gjp_scu_dir []
int	gjp_scu_wire_map [] = {0, 1, 2, 3, 4, 5, 6, 7, 0, 0}
int	bgl_machine_dir [8]
int	bgl_cps_dir [8]
const int	MAX_FILENAME_LEN = 100
	Maximum filname for START_CONF_FILE.
GlobalJobParameter	GJP
LatRanGen	LRG
Verbose	VRB
int	wfm_wire_map []
	Numbers of the wires corresponding to logical directions.
int	wfm_max_scu_poll
	Some crazy optimisation thing.
int	wfm_scu_diag []
	Some crazy optimisation thing.
Complex	I = Complex(0,1)
void(*	sproj_tr [8])(IFloat *f, IFloat *v, IFloat *w, int num_blk, int v_stride, int w_stride)
const int	MAX_LEN = 1023
const SCUDir	pos_dir [] = { SCU_XP, SCU_YP, SCU_ZP, SCU_TP }
const SCUDir	neg_dir [] = { SCU_XM, SCU_YM, SCU_ZM, SCU_TM }
leaf_function	leaf_map [5]
const char *	names [5]
const unsigned	MYBANK4_BASE = 0
const unsigned	MYBANK2_BASE = 0
const unsigned	MYBANK_SIZE = 0
int	CRAM_SCRATCH_INTS [CRAM_SCRATCH_SIZE]
unsigned int	CRAM_SCRATCH_ADDR = (unsigned int)CRAM_SCRATCH_INTS
const SCUDir	dir []
const int	MAX_LENGTH = 4096
const int	MAX_COPY = 128
unsigned int	vector_start
unsigned int	vector_end
unsigned int	vector_dest
unsigned int	wfm0_start
unsigned int	wfm0_end
unsigned int	wfm0_dest
unsigned int	wfm1_start
unsigned int	wfm1_end
unsigned int	wfm1_dest
unsigned int	stag_ds_start
unsigned int	stag_ds_end
unsigned int	stag_ds_dest
unsigned int	ghb_start
unsigned int	ghb_end
unsigned int	ghb_dest
int	smalloc_first_time = 1
unsigned	smalloc_addr_list [MAX_PTR_NUM]
unsigned	ma_smalloc_addr_list [MAX_PTR_NUM]
const int	MAX_CSUM_LENGTH = 200000
const char *	csum_id [] = {"CSUM_EVL_LAT","CSUM_EVL_MOM","CSUM_GLB_LOC","CSUM_GLB_SUM","CSUM_EVL_SRC","CSUM_EVL_SOL","CSUM_MMP_SUM","CSUM_EVL_MMP" }
const char *	comment = "evolution step"
const IFloat	MAX_ERROR = 1e-7
int	k
SCUDirArgIR *	SCUarg
SCUDirArgIR *	SCUarg_1
const unsigned	CBUF_MODE4 = 0xcb18c1ff
const unsigned	CBUF_MODE1 = 0xcb911548
const unsigned	CBUF_MODE2 = 0xcca52112
const unsigned	CBUF_MODE3 = 0xc98c6106
const char *	chi_l_filename = CWDPREFIX("chi_l.h")
const char *	chi_nl_filename = CWDPREFIX("chi_nl.h")
const int	MAX_TBUF_LEN = 1024
int	wfm_max_numchunk
int	wfm_numchunk [8]
IFloat **	wfm_send_ad
IFloat **	wfm_recv_ad
IFloat *	wfm_s_start [8]
IFloat *	wfm_r_start [8]
unsigned long	wfm_blklen [8]
unsigned long	wfm_numblk [8]
unsigned long	wfm_stride [8]
int	wilson_initted = 0
IFloat	tmp0_spproj [HALF_SPINOR_SIZE]
IFloat	tmp1_spproj [HALF_SPINOR_SIZE]
IFloat	tmp2_spproj [HALF_SPINOR_SIZE]
IFloat	tmp3_spproj [HALF_SPINOR_SIZE]
IFloat	tmp0_trick [HALF_SPINOR_SIZE]
IFloat	tmp1_trick [HALF_SPINOR_SIZE]
IFloat	tmp2_trick [HALF_SPINOR_SIZE]
IFloat	tmp3_trick [HALF_SPINOR_SIZE]
unsigned	wfm_tbl1
unsigned	wfm_tbl2
unsigned	wfm_tbl3
unsigned	wfm_tbl4
char *	cname_none = "(none)"
Float	ctor_time = 0.
const int	VAXPY_UNROLL = 6
register IFloat	f00r = 0.f00i=0.f01r=0.f01i=0.f02r=0.f02i=0.
register IFloat	f10r = 0.f10i=0.f11r=0.f11i=0.f12r=0.f12i=0.
register IFloat	f20r = 0.f20i=0.f21r=0.f21i=0.f22r=0.f22i=0.
IFloat	v1_0
IFloat	v1_1
IFloat	v1_2
IFloat	v1_3
IFloat	v1_4
IFloat	v1_5
IFloat	w1_0
IFloat	w1_1
IFloat	w1_2
IFloat	w1_3
IFloat	w1_4
IFloat	w1_5
IFloat *	vnext = v+24 + v_stride
IFloat *	wnext = w+24 + w_stride
	tf = f
	return
Matrix	CRAM_SCRATCH [5]
Matrix &	mat1 = CRAM_SCRATCH[0]
Matrix &	mat2 = CRAM_SCRATCH[1]
Matrix &	mat3 = CRAM_SCRATCH[2]
Matrix &	mat4 = CRAM_SCRATCH[3]
Matrix &	mat5 = CRAM_SCRATCH[4]
const Matrix *	new_mp = &mat1
Matrix *	result1_mp = &mat2
Matrix *	result_mp = &mat3
Matrix *	acumulate_mp = &mat4
const int	MAX_FILENAME = 200
const char *	FP_FORMAT_NAME []
const int	FP_FORMAT_ENTRIES = sizeof(FP_FORMAT_NAME)/sizeof(FP_FORMAT_NAME[0])
const char *	INT_FORMAT_NAME []
const int	INT_FORMAT_ENTRIES = sizeof(INT_FORMAT_NAME)/sizeof(INT_FORMAT_NAME[0])
const int